D: [iurt_root_command] chroot Building target platforms: x86_64 Building for target x86_64 Installing /home/pterjan/rpmbuild/SRPMS/python-rpy2-3.5.17-3.mga10.src.rpm Executing(%mkbuilddir): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.TxQt16 Executing(%prep): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.wqZN6t + umask 022 + cd /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + cd /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build + rm -rf rpy2-3.5.17 + /usr/lib/rpm/rpmuncompress -x /home/pterjan/rpmbuild/SOURCES/rpy2-3.5.17.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd rpy2-3.5.17 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/5362914cabfe116c9689bbc882434912e46c3058.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.M7ainx + umask 022 + cd /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rpy2-3.5.17 + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + mkdir -p /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + CXX=g++ + TMPDIR=/home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/pyproject-wheeldir Processing /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/lib64/R R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -L/usr/lib64/R/lib -lR -ltre -lpcre2-8 -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config BLAS_LIBS ['-lblas', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --cppflags ['-I/usr/lib64/R/include', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config LIBnn ['lib64', ''] cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/lib64/R R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -L/usr/lib64/R/lib -lR -ltre -lpcre2-8 -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config BLAS_LIBS ['-lblas', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --cppflags ['-I/usr/lib64/R/include', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config LIBnn ['lib64', ''] /usr/lib/python3.13/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.13/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running dist_info creating /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info writing /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/PKG-INFO writing dependency_links to /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/dependency_links.txt writing requirements to /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/requires.txt writing top-level names to /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/top_level.txt writing manifest file '/home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/SOURCES.txt' reading manifest file '/home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching '_rinterface_cffi_build' warning: no files found matching 'rpy/__init__.py' warning: no files found matching 'rpy/situation.py' warning: no files found matching '*.py' under directory 'rpy/robjects' warning: no files found matching '*.py' under directory 'rpy/ipython' warning: no files found matching '*.py' under directory 'rpy/interactive' warning: no files found matching '*.py' under directory 'rpy/rlike' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file '/home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2.egg-info/SOURCES.txt' creating '/home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/pip-modern-metadata-x3vwkhpp/rpy2-3.5.17.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: rpy2 Building wheel for rpy2 (pyproject.toml): started Running command Building wheel for rpy2 (pyproject.toml) cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/lib64/R R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -L/usr/lib64/R/lib -lR -ltre -lpcre2-8 -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config BLAS_LIBS ['-lblas', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --cppflags ['-I/usr/lib64/R/include', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config LIBnn ['lib64', ''] cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/lib64/R R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -L/usr/lib64/R/lib -lR -ltre -lpcre2-8 -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config BLAS_LIBS ['-lblas', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config --cppflags ['-I/usr/lib64/R/include', ''] R exec path: /usr/lib64/R/bin/R Looking for R CONFIG with: /usr/lib64/R/bin/R CMD config LIBnn ['lib64', ''] /usr/lib/python3.13/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.13/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build cffi mode: CFFI_MODE.ANY running build_py file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found creating build/lib.linux-x86_64-cpython-313/rpy2 copying rpy2/situation.py -> build/lib.linux-x86_64-cpython-313/rpy2 copying rpy2/rinterface.py -> build/lib.linux-x86_64-cpython-313/rpy2 copying rpy2/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2 copying rpy2/_rinterface_cffi_build.py -> build/lib.linux-x86_64-cpython-313/rpy2 creating build/lib.linux-x86_64-cpython-313/rpy2/rlike copying rpy2/rlike/functional.py -> build/lib.linux-x86_64-cpython-313/rpy2/rlike copying rpy2/rlike/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/rlike copying rpy2/rlike/container.py -> build/lib.linux-x86_64-cpython-313/rpy2/rlike copying rpy2/rlike/indexing.py -> build/lib.linux-x86_64-cpython-313/rpy2/rlike creating build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/openrlib.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/na_values.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/conversion.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/embedded.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/callbacks.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/ffi_proxy.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/embedded_mswin.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/bufferprotocol.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/_rinterface_capi.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/memorymanagement.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/sexp.py -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib creating build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/conversion.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/pandas2ri.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/language.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/methods.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/vectors.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/functions.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/numpy2ri.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/packages_utils.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/robject.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/constants.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/environments.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/packages.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects copying rpy2/robjects/help.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects creating build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/dbplyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/grid.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/ggplot2.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/grdevices.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/dplyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib copying rpy2/robjects/lib/tidyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/robjects/lib creating build/lib.linux-x86_64-cpython-313/rpy2/interactive copying rpy2/interactive/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/interactive copying rpy2/interactive/process_revents.py -> build/lib.linux-x86_64-cpython-313/rpy2/interactive copying rpy2/interactive/packages.py -> build/lib.linux-x86_64-cpython-313/rpy2/interactive creating build/lib.linux-x86_64-cpython-313/rpy2/ipython copying rpy2/ipython/html.py -> build/lib.linux-x86_64-cpython-313/rpy2/ipython copying rpy2/ipython/rmagic.py -> build/lib.linux-x86_64-cpython-313/rpy2/ipython copying rpy2/ipython/ggplot.py -> build/lib.linux-x86_64-cpython-313/rpy2/ipython copying rpy2/ipython/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/ipython creating build/lib.linux-x86_64-cpython-313/rpy2/tests copying rpy2/tests/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests copying rpy2/tests/utils.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests creating build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_pairlist.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_endr.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_openrlib.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_bool.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_byte.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_numpy.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_bufferprotocol.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vectors.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_na.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_environment.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_conversion.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_threading.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_complex.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_noinitialization.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_str.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_int.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_float.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_symbol.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_sexp.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_embedded_r.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_functions.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_list.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_memorymanagement.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_callbacks.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_lang.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_externalptr.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rinterface creating build/lib.linux-x86_64-cpython-313/rpy2/tests/rlike copying rpy2/tests/rlike/test_indexing.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rlike copying rpy2/tests/rlike/test_functional.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rlike copying rpy2/tests/rlike/test_container.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/rlike creating build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_rs4.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_methods.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_help.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_robjects.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_extractdelegator.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_function.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_environment.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_conversion.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_formula.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_language.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_packages_utils.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_array.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_packages.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_serialization.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_datetime.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_dataframe.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_pandas_conversions.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_conversion_numpy.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_translated_function.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_factor.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects creating build/lib.linux-x86_64-cpython-313/rpy2/tests/ipython copying rpy2/tests/ipython/test_ggplot.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/ipython copying rpy2/tests/ipython/test_html.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/ipython copying rpy2/tests/ipython/test_rmagic.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/ipython copying rpy2/tests/ipython/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/ipython creating build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_dbplyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_tidyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_dplyr.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_grid.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_grdevices.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_ggplot2.py -> build/lib.linux-x86_64-cpython-313/rpy2/tests/robjects/lib running egg_info writing rpy2.egg-info/PKG-INFO writing dependency_links to rpy2.egg-info/dependency_links.txt writing requirements to rpy2.egg-info/requires.txt writing top-level names to rpy2.egg-info/top_level.txt reading manifest file 'rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching '_rinterface_cffi_build' warning: no files found matching 'rpy/__init__.py' warning: no files found matching 'rpy/situation.py' warning: no files found matching '*.py' under directory 'rpy/robjects' warning: no files found matching '*.py' under directory 'rpy/ipython' warning: no files found matching '*.py' under directory 'rpy/interactive' warning: no files found matching '*.py' under directory 'rpy/rlike' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'rpy2.egg-info/SOURCES.txt' copying rpy2/rinterface_lib/R_API.h -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/R_API_eventloop.c -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/RPY2.h -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/_bufferprotocol.c -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found generating cffi module 'build/lib.linux-x86_64-cpython-313/_rinterface_cffi_abi.py' running build_ext generating cffi module 'build/temp.linux-x86_64-cpython-313/_rinterface_cffi_api.c' creating build/temp.linux-x86_64-cpython-313 building 'rpy2.rinterface_lib._bufferprotocol' extension creating build/temp.linux-x86_64-cpython-313/rpy2/rinterface_lib gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fPIC -I/usr/include/python3.13 -c rpy2/rinterface_lib/_bufferprotocol.c -o build/temp.linux-x86_64-cpython-313/rpy2/rinterface_lib/_bufferprotocol.o gcc -shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full build/temp.linux-x86_64-cpython-313/rpy2/rinterface_lib/_bufferprotocol.o -L/usr/lib64 -lpython3.13 -o build/lib.linux-x86_64-cpython-313/rpy2/rinterface_lib/_bufferprotocol.cpython-313-x86_64-linux-gnu.so building '_rinterface_cffi_api' extension creating build/temp.linux-x86_64-cpython-313/build/temp.linux-x86_64-cpython-313 gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fPIC -DRPY2_RLEN_LONG=True -DR_INTERFACE_PTRS=True -Irpy2/rinterface_lib/ -I/usr/include/python3.13 -c build/temp.linux-x86_64-cpython-313/_rinterface_cffi_api.c -o build/temp.linux-x86_64-cpython-313/build/temp.linux-x86_64-cpython-313/_rinterface_cffi_api.o -std=c99 gcc -shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full build/temp.linux-x86_64-cpython-313/build/temp.linux-x86_64-cpython-313/_rinterface_cffi_api.o -L/usr/lib64/R/lib -L/usr/lib64 -lR -ltre -lpcre2-8 -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lblas -lpython3.13 -o build/lib.linux-x86_64-cpython-313/_rinterface_cffi_api.abi3.so -Wl,--export-dynamic -fopenmp -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-rpath,/usr/lib64/R/lib64 /usr/bin/ld: cannot find -lblas: No such file or directory collect2: error: ld returned 1 exit status error: command '/usr/bin/gcc' failed with exit code 1 error: subprocess-exited-with-error × Building wheel for rpy2 (pyproject.toml) did not run successfully. │ exit code: 1 ╰─> No available output. note: This error originates from a subprocess, and is likely not a problem with pip. full command: /usr/bin/python3 /usr/lib/python3.13/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17/.pyproject-builddir/tmpcmbg5xji cwd: /home/pterjan/rpmbuild/BUILD/python-rpy2-3.5.17-build/rpy2-3.5.17 Building wheel for rpy2 (pyproject.toml): finished with status 'error' ERROR: Failed building wheel for rpy2 Failed to build rpy2 ERROR: Failed to build one or more wheels error: Bad exit status from /home/pterjan/rpmbuild/tmp/rpm-tmp.M7ainx (%build) RPM build errors: Bad exit status from /home/pterjan/rpmbuild/tmp/rpm-tmp.M7ainx (%build) I: [iurt_root_command] ERROR: chroot