D: [iurt_root_command] chroot Building target platforms: x86_64 Building for target x86_64 Installing /home/pterjan/rpmbuild/SRPMS/openbabel-3.1.1-24.mga10.src.rpm Executing(%mkbuilddir): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.jmT1JB Executing(%prep): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.mQJIg1 + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + rm -rf openbabel-3.1.1 + /usr/lib/rpm/rpmuncompress -x /home/pterjan/rpmbuild/SOURCES/openbabel-3.1.1-source.tar.bz2 + STATUS=0 + '[' 0 -ne 0 ']' + cd openbabel-3.1.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-perl.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-plugindir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-pkgconfig-and-cmake-libdir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-noswig-rubymethod.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-ruby19-vendorarch.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-2.4.1-ruby27.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/0001-CMake-fix-time-check-typo-fixes-build-failure-w-GCC-.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/001-Remove-std-binary-function-which-is-removed-in-C17.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/001-Remove-deprecated-std-bind1st-and-std-binder1st.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/002-Remove-deprecated-std-bind2nd.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/001-Resolve-ImportError-with-make-test.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/002-Fix-test-failure-with-Python-3.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-3.1.1-cmake4-compat.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + magick src/GUI/babel.xpm -transparent white babel.png + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.mdqLuB + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd openbabel-3.1.1 + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -Wno-dev -S . -B build -DCMAKE_CXX_FLAGS_RELWITHDEBINFO:STRING=-DNDEBUG -DCMAKE_C_FLAGS_RELWITHDEBINFO:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_LIBDIR:PATH=lib64 -DCMAKE_INSTALL_LIBEXECDIR:PATH=libexec -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_RUNSTATEDIR:PATH=/run -DCMAKE_INSTALL_SYSCONFDIR:PATH=/etc -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DCMAKE_BUILD_TYPE=RelWithDebInfo -DLIB_SUFFIX=64 -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON '-DCMAKE_MODULE_LINKER_FLAGS=-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF -DCMAKE_INSTALL_LIBDIR:PATH=lib64 -DCMAKE_SKIP_INSTALL_RPATH:BOOL=ON -DBUILD_GUI:BOOL=ON -DENABLE_VERSIONED_FORMATS=false -DPYTHON_BINDINGS:BOOL=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPERL_BINDINGS:BOOL=ON -DRUBY_BINDINGS:BOOL=ON -DRUN_SWIG=true -DOPENBABEL_USE_SYSTEM_INCHI=ON -DENABLE_TESTS:BOOL=ON -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found INCHI: /usr/lib64/libinchi.so -- Found LibXml2: /usr/lib64/libxml2.so (found version "2.15.1") -- Found ZLIB: /usr/lib64/libz.so (found version "1.3.1") -- Found wxWidgets: -L/usr/lib64;-pthread;;;-lwx_baseu-3.2;-lwx_gtk3u_core-3.2 (found version "3.2.9") -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - not found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - not found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - not found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Checking available shared pointer... -- Performing Test HAVE_STD_SHARED_PTR -- Performing Test HAVE_STD_SHARED_PTR - Success -- Performing Test HAVE_STD_TR1_SHARED_PTR -- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success -- Use std::shared_ptr in memory -- Found Boost: /usr/lib64/cmake/Boost-1.89.0/BoostConfig.cmake (found version "1.89.0") found components: program_options iostreams -- Eigen3 version .. found in /usr/include, but at least version 2.91.0 is required -- Could NOT find Eigen3 (missing: EIGEN3_VERSION_OK) (Required is at least version "2.91.0") -- Eigen2 version .. found in /usr/include, but at least version 2.0.0 is required -- Could NOT find Eigen2 (missing: EIGEN2_VERSION_OK) (Required is at least version "2.0.0") -- Found Boost: /usr/lib64/cmake/Boost-1.89.0/BoostConfig.cmake (found version "1.89.0") found components: filesystem iostreams unit_test_framework -- maeparser include dir set as '/usr/include' -- maeparser libraries set as '/usr/lib64/libmaeparser.so' -- Maestro formats will be supported. Using MaeParser libraries at /usr/lib64/libmaeparser.so. -- coordgen include dir set as /usr/include -- coordgen libraries set as '/usr/lib64/libcoordgen.so' -- coordgen templates file set as '/usr/share/coordgen/templates.mae' -- Coordinate generation with Coordgen will be supported. Using Coordgen libraries at /usr/lib64/libcoordgen.so. -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Found RapidJSON: /usr/include (found suitable version "1.1.0", minimum required is "1.1.0") -- JSON formats will be supported. Using RapidJSON 1.1.0 at /usr/include -- Checking for module 'cairo' -- Found cairo, version 1.18.4 -- Found Cairo: /usr/lib64/libcairo.so -- Cairo found. PNG output will be supported. -- Could NOT find Boost: missing: system (found /usr/lib64/cmake/Boost-1.89.0/BoostConfig.cmake (found suitable version "1.89.0", minimum required is "1.45.0")) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost: /usr/lib64/cmake/Boost-1.89.0/BoostConfig.cmake (found version "1.89.0") found components: program_options iostreams -- Looking for getopt -- Looking for getopt - found -- Attempting to build the GUI -- wxWidgets found => GUI will be built -- Found PythonInterp: /usr/bin/python3 (found version "3.13.11") -- Found SWIG: /usr/bin/swig (found version "4.3.0") -- Found SWIG: /usr/bin/swig (found suitable version "4.3.0", minimum required is "2.0") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.11") -- Python bindings will be compiled -- Found Perl: /usr/bin/perl (found version "5.42.0") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.42.0") -- Perl bindings will be compiled -- Found Ruby: /usr/bin/ruby (found version "3.4.7") -- Ruby bindings will be compiled -- Configuring done (6.9s) -- Generating done (0.6s) CMake Warning: Manually-specified variables were not used by the project: BUILD_STATIC_LIBS CMAKE_C_FLAGS_RELEASE CMAKE_C_FLAGS_RELWITHDEBINFO CMAKE_INSTALL_DO_STRIP SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build + /usr/bin/cmake --build build -j16 --verbose Change Dir: '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j16 /usr/bin/cmake -S/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 -B/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/CMakeFiles /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/CMakeFiles/openbabel.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/alias.cpp.o -MF CMakeFiles/openbabel.dir/alias.cpp.o.d -o CMakeFiles/openbabel.dir/alias.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/alias.cpp [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/builder.cpp.o -MF CMakeFiles/openbabel.dir/builder.cpp.o.d -o CMakeFiles/openbabel.dir/builder.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/builder.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/vector3.cpp.o -MF 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CMakeFiles/openbabel.dir/chargemodel.cpp.o CMakeFiles/openbabel.dir/data.cpp.o CMakeFiles/openbabel.dir/data_utilities.cpp.o CMakeFiles/openbabel.dir/descriptor.cpp.o CMakeFiles/openbabel.dir/elements.cpp.o CMakeFiles/openbabel.dir/fingerprint.cpp.o CMakeFiles/openbabel.dir/forcefield.cpp.o CMakeFiles/openbabel.dir/format.cpp.o CMakeFiles/openbabel.dir/generic.cpp.o CMakeFiles/openbabel.dir/graphsym.cpp.o CMakeFiles/openbabel.dir/grid.cpp.o CMakeFiles/openbabel.dir/griddata.cpp.o CMakeFiles/openbabel.dir/isomorphism.cpp.o CMakeFiles/openbabel.dir/kekulize.cpp.o CMakeFiles/openbabel.dir/locale.cpp.o CMakeFiles/openbabel.dir/matrix.cpp.o CMakeFiles/openbabel.dir/mcdlutil.cpp.o CMakeFiles/openbabel.dir/molchrg.cpp.o CMakeFiles/openbabel.dir/mol.cpp.o CMakeFiles/openbabel.dir/obconversion.cpp.o CMakeFiles/openbabel.dir/oberror.cpp.o CMakeFiles/openbabel.dir/obfunctions.cpp.o CMakeFiles/openbabel.dir/obiter.cpp.o CMakeFiles/openbabel.dir/obutil.cpp.o CMakeFiles/openbabel.dir/op.cpp.o CMakeFiles/openbabel.dir/parsmart.cpp.o CMakeFiles/openbabel.dir/patty.cpp.o CMakeFiles/openbabel.dir/phmodel.cpp.o CMakeFiles/openbabel.dir/plugin.cpp.o CMakeFiles/openbabel.dir/pointgroup.cpp.o CMakeFiles/openbabel.dir/query.cpp.o CMakeFiles/openbabel.dir/rand.cpp.o CMakeFiles/openbabel.dir/reactionfacade.cpp.o CMakeFiles/openbabel.dir/residue.cpp.o CMakeFiles/openbabel.dir/ring.cpp.o CMakeFiles/openbabel.dir/rotamer.cpp.o CMakeFiles/openbabel.dir/rotor.cpp.o CMakeFiles/openbabel.dir/spectrophore.cpp.o CMakeFiles/openbabel.dir/tautomer.cpp.o CMakeFiles/openbabel.dir/tokenst.cpp.o CMakeFiles/openbabel.dir/transform.cpp.o CMakeFiles/openbabel.dir/typer.cpp.o CMakeFiles/openbabel.dir/obmolecformat.cpp.o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o CMakeFiles/openbabel.dir/depict/depict.cpp.o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o CMakeFiles/openbabel.dir/math/transform3d.cpp.o CMakeFiles/openbabel.dir/math/vector3.cpp.o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o CMakeFiles/openbabel.dir/stereo/perception.cpp.o CMakeFiles/openbabel.dir/stereo/facade.cpp.o CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_symlink_library ../lib64/libopenbabel.so.7.0.0 ../lib64/libopenbabel.so.7 ../lib64/libopenbabel.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 14%] Built target openbabel /usr/bin/gmake -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src 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src/formats/CMakeFiles/mol2format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 15%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o [ 15%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o [ 15%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o [ 15%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cansmidescriptor.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 16%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o /usr/bin/gmake -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger2.cpp [ 17%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 17%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/eem.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eem.cpp /usr/bin/gmake -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build [ 17%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addfilename.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o -MF CMakeFiles/inchiformat.dir/inchiformat.cpp.o.d -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/inchiformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmdlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o -MF CMakeFiles/mdlformat.dir/mdlformat.cpp.o.d -o CMakeFiles/mdlformat.dir/mdlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldgaff.cpp [ 17%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o [ 17%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o [ 18%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmol2format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o -MF CMakeFiles/mol2format.dir/mol2format.cpp.o.d -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mol2format.cpp [ 18%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dnulformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o -MF CMakeFiles/nulformat.dir/nulformat.cpp.o.d -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nulformat.cpp [ 20%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsmilesformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o -MF CMakeFiles/smilesformat.dir/smilesformat.cpp.o.d -o CMakeFiles/smilesformat.dir/smilesformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcopyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o -MF CMakeFiles/copyformat.dir/copyformat.cpp.o.d -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/copyformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o -MF CMakeFiles/MNAformat.dir/MNAformat.cpp.o.d -o CMakeFiles/MNAformat.dir/MNAformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/MNAformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpainterformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o -MF CMakeFiles/painterformat.dir/painterformat.cpp.o.d -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/painterformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dasciiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o -MF CMakeFiles/asciiformat.dir/asciiformat.cpp.o.d -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/asciiformat.cpp [ 21%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o [ 21%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpdbformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o -MF CMakeFiles/pdbformat.dir/pdbformat.cpp.o.d -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmolreport_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/molreport.dir/molreport.cpp.o -MF CMakeFiles/molreport.dir/molreport.cpp.o.d -o CMakeFiles/molreport.dir/molreport.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molreport.cpp [ 21%] Linking CXX shared module ../../lib64/copyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 [ 22%] Linking CXX shared module ../../lib64/nulformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 [ 22%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cmpdfilter.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addinindex.cpp [ 22%] Linking CXX shared module ../../lib64/molreport.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/copyformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so [ 22%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpainterformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -MF CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o.d -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/commandpainter.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/nulformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/nulformat.so CMakeFiles/nulformat.dir/nulformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 22%] Built target copyformat [ 22%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o [ 22%] Built target nulformat cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dasciiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -MF CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o.d -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/asciipainter.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addpolarh.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/groupcontrib.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/molreport.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 22%] Built target molreport /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 22%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpovrayformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o -MF CMakeFiles/povrayformat.dir/povrayformat.cpp.o.d -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/gasteiger.cpp [ 23%] Linking CXX shared module ../../lib64/MNAformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 [ 23%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o [ 23%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/none.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/none.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger3.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:684:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 684 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:17: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:684:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:702:70: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 702 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:702:29: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:35: warning: '%+d' directive output may be truncated writing between 2 and 6 bytes into a region of size 3 [-Wformat-truncation=] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:34: note: directive argument in the range [-32768, 32767] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 3 and 7 bytes into a destination of size 3 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/MNAformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so [ 23%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o -MF CMakeFiles/inchiformat.dir/getinchi.cpp.o.d -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/getinchi.cpp [ 23%] Built target MNAformat [ 23%] Linking CXX shared module ../../lib64/painterformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 [ 23%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -MF CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o.d -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/unique.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/painterformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 23%] Built target painterformat [ 23%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldghemical.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addnonpolarh.cpp [ 24%] Linking CXX shared module ../../lib64/asciiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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-Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/asciiformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 24%] Built target asciiformat /usr/bin/gmake -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 24%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dreportformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o -MF CMakeFiles/reportformat.dir/reportformat.cpp.o.d -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/reportformat.cpp [ 25%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsvgformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o -MF CMakeFiles/svgformat.dir/svgformat.cpp.o.d -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/svgformat.cpp [ 25%] Linking CXX shared module ../../lib64/mol2format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mol2format.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Built target mol2format [ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/changecell.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/mmff94.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/fingerecfp.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/filters.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/fromfile.cpp [ 25%] Linking CXX shared module ../../lib64/inchiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~ [ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:22: note: directive argument in the range [-2147483648, 2147483547] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/iomanip:47, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:27: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'std::string OpenBabel::MDLFormat::GetTimeDate()' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:13: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 11 and 56 bytes into a destination of size 11 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/inchidescriptor.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/inchiformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.cpp.o CMakeFiles/inchiformat.dir/getinchi.cpp.o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Linking CXX shared module ../../lib64/pdbformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 [ 25%] Built target inchiformat /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o [ 25%] Linking CXX shared module ../../lib64/povrayformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtextformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/textformat.dir/textformat.cpp.o -MF CMakeFiles/textformat.dir/textformat.cpp.o.d -o CMakeFiles/textformat.dir/textformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/textformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtitleformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o -MF CMakeFiles/titleformat.dir/titleformat.cpp.o.d -o CMakeFiles/titleformat.dir/titleformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/titleformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pdbformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Built target pdbformat [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/povrayformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/smartsdescriptors.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 26%] Built target povrayformat [ 26%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldmmff94.cpp [ 27%] Linking CXX shared module ../../lib64/reportformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/reportformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/reportformat.so CMakeFiles/reportformat.dir/reportformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake "--color=" [ 27%] Built target reportformat /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build [ 27%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpngformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o -MF CMakeFiles/pngformat.dir/pngformat.cpp.o.d -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pngformat.cpp [ 27%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dacesformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o -MF CMakeFiles/acesformat.dir/acesformat.cpp.o.d -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acesformat.cpp [ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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-isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefielduff.cpp /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 28%] Linking CXX shared module ../../lib64/textformat.so [ 29%] Linking CXX shared module ../lib64/plugin_fingerprints.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 [ 29%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dabinitformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o -MF CMakeFiles/abinitformat.dir/abinitformat.cpp.o.d -o CMakeFiles/abinitformat.dir/abinitformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/abinitformat.cpp [ 29%] Linking CXX shared module ../../lib64/svgformat.so [ 30%] Linking CXX shared module ../../lib64/titleformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/textformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/titleformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_fingerprints.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 30%] Built target textformat /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend [ 30%] Built target titleformat gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake "--color=" [ 30%] Built target plugin_fingerprints /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/svgformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delnonpolarh.cpp [ 30%] Built target svgformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 30%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dadfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o -MF CMakeFiles/adfformat.dir/adfformat.cpp.o.d -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/adfformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 30%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o [ 30%] Linking CXX shared module ../lib64/plugin_descriptors.so /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Daoforceformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -MF CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o.d -o CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/aoforceformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 31%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcastepformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o -MF CMakeFiles/castepformat.dir/castepformat.cpp.o.d -o CMakeFiles/castepformat.dir/castepformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/castepformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_descriptors.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 31%] Built target plugin_descriptors [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen2D.cpp /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 32%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcrystal09format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o -MF CMakeFiles/crystal09format.dir/crystal09format.cpp.o.d -o CMakeFiles/crystal09format.dir/crystal09format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crystal09format.cpp [ 32%] Linking CXX shared module ../lib64/plugin_charges.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 [ 33%] Linking CXX shared module ../../lib64/pngformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_charges.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Built target plugin_charges [ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/fillUC.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pngformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Built target pngformat /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddaltonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o -MF CMakeFiles/daltonformat.dir/daltonformat.cpp.o.d -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/daltonformat.cpp [ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/forcefield.cpp /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddmolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o -MF CMakeFiles/dmolformat.dir/dmolformat.cpp.o.d -o CMakeFiles/dmolformat.dir/dmolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dmolformat.cpp [ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen3d.cpp [ 33%] Linking CXX shared module ../../lib64/acesformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:23: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2857:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2857 | snprintf(tcount, 10, "%d", i); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2857:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/acesformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Built target acesformat /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake "--color=" [ 33%] Linking CXX shared module ../../lib64/abinitformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfchkformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o -MF CMakeFiles/fchkformat.dir/fchkformat.cpp.o.d -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/abinitformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Built target abinitformat [ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o [ 34%] Linking CXX shared module ../../lib64/castepformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/largest.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/largest.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'void OpenBabel::OBMol2Cansmi::ToCansmilesString(OpenBabel::OBCanSmiNode*, std::string&, OpenBabel::OBBitVec&, std::vector&, std::vector&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:32: warning: '%d' directive output may be truncated writing between 1 and 11 bytes into a region of size 8 [-Wformat-truncation=] 3531 | snprintf(digits, 8, "%d", bci->ringdigit); | ^~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:31: note: directive argument in the range [-2147483648, 99] 3531 | snprintf(digits, 8, "%d", bci->ringdigit); | ^~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OBMol2Cansmi::ToCansmilesString(OpenBabel::OBCanSmiNode*, std::string&, OpenBabel::OBBitVec&, std::vector&, std::vector&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 12 bytes into a destination of size 8 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/castepformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Built target castepformat /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -MF CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o.d -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhiaimsformat.cpp [ 34%] Linking CXX shared module ../../lib64/aoforceformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/aoforceformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Built target aoforceformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 35%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgamessformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o -MF CMakeFiles/gamessformat.dir/gamessformat.cpp.o.d -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessformat.cpp [ 35%] Linking CXX shared module ../../lib64/mdlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mdlformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 35%] Linking CXX shared module ../../lib64/daltonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 [ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/loader.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/loader.cpp [ 36%] Built target mdlformat /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgaussformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o -MF CMakeFiles/gaussformat.dir/gaussformat.cpp.o.d -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gaussformat.cpp [ 36%] Linking CXX shared module ../../lib64/dmolformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 [ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/neutralize.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Built target daltonformat /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/dmolformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -MF CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o.d -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausscubeformat.cpp [ 36%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -MF CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o.d -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausszmatformat.cpp [ 36%] Built target dmolformat /usr/bin/gmake -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake "--color=" [ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opsplit.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgulpformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o -MF CMakeFiles/gulpformat.dir/gulpformat.cpp.o.d -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gulpformat.cpp [ 37%] Linking CXX shared module ../../lib64/crystal09format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/crystal09format.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 37%] Built target crystal09format /usr/bin/gmake -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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src/formats/CMakeFiles/jaguarformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/adfformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fhiaimsformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 37%] Built target adfformat /usr/bin/gmake -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend [ 37%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Djaguarformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -MF CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o.d -o CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/jaguarformat.cpp [ 37%] Built target fhiaimsformat /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmolproformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o -MF CMakeFiles/molproformat.dir/molproformat.cpp.o.d -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molproformat.cpp [ 38%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmopacformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o -MF CMakeFiles/mopacformat.dir/mopacformat.cpp.o.d -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mopacformat.cpp [ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/partialcharges.cpp /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake "--color=" [ 38%] Linking CXX shared module ../../lib64/smilesformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dnwchemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -MF CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o.d -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nwchemformat.cpp [ 38%] Linking CXX shared module ../../lib64/hinformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/smilesformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Built target smilesformat /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 39%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpwscfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -MF CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o.d -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pwscfformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/hinformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 39%] Built target hinformat [ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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-Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 40%] Built target gulpformat /usr/bin/gmake -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend gmake[2]: Entering directory 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src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dqchemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o -MF CMakeFiles/qchemformat.dir/qchemformat.cpp.o.d -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/qchemformat.cpp [ 40%] Linking CXX shared module ../../lib64/fchkformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 [ 40%] Linking CXX shared module ../../lib64/gausszmatformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gausszmatformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 40%] Built target fchkformat [ 40%] Built target gausszmatformat [ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/sort.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/sort.cpp [ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opisomorph.cpp /usr/bin/gmake -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 40%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsiestaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o -MF CMakeFiles/siestaformat.dir/siestaformat.cpp.o.d -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/siestaformat.cpp [ 40%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/ophighlight.cpp [ 41%] Linking CXX shared module ../../lib64/jaguarformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/jaguarformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Built target jaguarformat /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -MF CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o.d -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/turbomoleformat.cpp [ 42%] Linking CXX shared module ../../lib64/gausscubeformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 [ 42%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/xout.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/xout.cpp [ 42%] Linking CXX shared module ../../lib64/molproformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gausscubeformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend [ 42%] Built target gausscubeformat /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o [ 43%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxsfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o -MF CMakeFiles/xsfformat.dir/xsfformat.cpp.o.d -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xsfformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dvaspformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o -MF CMakeFiles/vaspformat.dir/vaspformat.cpp.o.d -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/molproformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/molproformat.so CMakeFiles/molproformat.dir/molproformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Built target molproformat /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/zindoformat.cpp [ 43%] Linking CXX shared module ../../lib64/pwscfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pwscfformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Built target pwscfformat /usr/bin/gmake -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/maeformat.cpp [ 43%] Linking CXX shared module ../../lib64/turbomoleformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/turbomoleformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Built target turbomoleformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend [ 43%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgamessukformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -MF CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o.d -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessukformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dorcaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o -MF CMakeFiles/orcaformat.dir/orcaformat.cpp.o.d -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/orcaformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o -MF CMakeFiles/APIInterface.dir/APIInterface.cpp.o.d -o CMakeFiles/APIInterface.dir/APIInterface.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/APIInterface.cpp [ 44%] Linking CXX shared module ../../lib64/mopacformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 [ 44%] Linking CXX shared module ../../lib64/qchemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mopacformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 44%] Built target mopacformat /usr/bin/gmake -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend gmake[2]: Entering directory 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-I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o -MF CMakeFiles/PQSformat.dir/PQSformat.cpp.o.d -o CMakeFiles/PQSformat.dir/PQSformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/PQSformat.cpp [ 45%] Linking CXX shared module 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/usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 45%] Linking CXX shared module ../../lib64/gamessformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 [ 45%] Built target zindoformat /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dalchemyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -MF CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o.d -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/alchemyformat.cpp [ 46%] Linking CXX shared module ../../lib64/xsfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/amberformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_ops.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so 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/usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 48%] Built target plugin_ops /usr/bin/gmake -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build 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-isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o -MF CMakeFiles/bgfformat.dir/bgfformat.cpp.o.d -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/bgfformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/siestaformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target siestaformat /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dboxformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o -MF CMakeFiles/boxformat.dir/boxformat.cpp.o.d -o CMakeFiles/boxformat.dir/boxformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/boxformat.cpp [ 49%] Linking CXX shared module ../../lib64/nwchemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_forcefields.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target plugin_forcefields /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcacaoformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -MF CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o.d -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacaoformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/nwchemformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target nwchemformat /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake "--color=" [ 49%] Linking CXX shared module ../../lib64/CSRformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcacheformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o -MF CMakeFiles/cacheformat.dir/cacheformat.cpp.o.d -o CMakeFiles/cacheformat.dir/cacheformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacheformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/CSRformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target CSRformat /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcarformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/carformat.dir/carformat.cpp.o -MF CMakeFiles/carformat.dir/carformat.cpp.o.d -o CMakeFiles/carformat.dir/carformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/carformat.cpp [ 50%] Linking CXX shared module ../../lib64/PQSformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 [ 51%] Linking CXX shared module ../../lib64/alchemyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 [ 51%] Linking CXX shared module ../../lib64/gaussformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 [ 51%] Linking CXX shared module ../../lib64/acrformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/PQSformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Linking CXX shared module ../../lib64/amberformat.so [ 51%] Built target PQSformat /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/alchemyformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake "--color=" [ 51%] Built target alchemyformat /usr/bin/gmake -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cccformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchem3dformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -MF CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o.d -o CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chem3dformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/amberformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/acrformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gaussformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target amberformat [ 51%] Built target gaussformat [ 51%] Linking CXX shared module ../../lib64/balstformat.so /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 [ 51%] Built target acrformat /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdrawct_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -MF CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o.d -o CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawct.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcifformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o -MF CMakeFiles/cifformat.dir/cifformat.cpp.o.d -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cifformat.cpp [ 51%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -MF CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o.d -o CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemtoolformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/balstformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target balstformat [ 51%] Linking CXX shared module ../../lib64/boxformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build [ 51%] Linking CXX shared module ../../lib64/cacheformat.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 [ 51%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cofformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/boxformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target boxformat /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cacheformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target cacheformat /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcrkformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o -MF CMakeFiles/crkformat.dir/crkformat.cpp.o.d -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crkformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcssrformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o -MF CMakeFiles/cssrformat.dir/cssrformat.cpp.o.d -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cssrformat.cpp [ 51%] Linking CXX shared module ../../lib64/bgfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 [ 52%] Linking CXX shared module ../../lib64/cacaoformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bgfformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 52%] Built target bgfformat /usr/bin/gmake -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake "--color=" [ 52%] Linking CXX shared module ../../lib64/carformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -MF CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o.d -o CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dlpolyformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cacaoformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Built target cacaoformat /usr/bin/gmake -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/carformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so [ 53%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dexyzformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o -MF CMakeFiles/exyzformat.dir/exyzformat.cpp.o.d -o CMakeFiles/exyzformat.dir/exyzformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/exyzformat.cpp [ 53%] Built target carformat /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o [ 53%] Linking CXX shared module ../../lib64/cccformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -MF CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o.d -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastsearchformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cccformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Built target cccformat /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Linking CXX shared module ../../lib64/chemtoolformat.so [ 53%] Linking CXX shared module ../../lib64/chem3dformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 [ 53%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfastaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o -MF CMakeFiles/fastaformat.dir/fastaformat.cpp.o.d -o CMakeFiles/fastaformat.dir/fastaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastaformat.cpp [ 53%] Linking CXX shared module ../../lib64/chemdrawct.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemtoolformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chem3dformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Built target chemtoolformat /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake "--color=" [ 53%] Built target chem3dformat /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdrawct.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Built target chemdrawct /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfeatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/featformat.dir/featformat.cpp.o -MF CMakeFiles/featformat.dir/featformat.cpp.o.d -o CMakeFiles/featformat.dir/featformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/featformat.cpp [ 53%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfhformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o -MF CMakeFiles/fhformat.dir/fhformat.cpp.o.d -o CMakeFiles/fhformat.dir/fhformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fingerprintformat.cpp [ 53%] Linking CXX shared module ../../lib64/vaspformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 [ 53%] Linking CXX shared module ../../lib64/cssrformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 [ 53%] Linking CXX shared module ../../lib64/orcaformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cssrformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Linking CXX shared module ../../lib64/crkformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/vaspformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/orcaformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Built target cssrformat /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake "--color=" [ 53%] Built target vaspformat [ 53%] Built target orcaformat /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfpsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o -MF CMakeFiles/fpsformat.dir/fpsformat.cpp.o.d -o CMakeFiles/fpsformat.dir/fpsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fpsformat.cpp [ 54%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o [ 54%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfreefracformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o -MF CMakeFiles/freefracformat.dir/freefracformat.cpp.o.d -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/freefracformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dghemicalformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -MF CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o.d -o CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/ghemicalformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/crkformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 54%] Built target crkformat /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 54%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgromos96format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o -MF CMakeFiles/gromos96format.dir/gromos96format.cpp.o.d -o CMakeFiles/gromos96format.dir/gromos96format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gromos96format.cpp [ 55%] Linking CXX shared module ../../lib64/fhformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 [ 55%] Linking CXX shared module ../../lib64/featformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fhformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Built target fhformat /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend [ 55%] Linking CXX shared module ../../lib64/gamessukformat.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/featformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Built target featformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgroformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/groformat.dir/groformat.cpp.o -MF CMakeFiles/groformat.dir/groformat.cpp.o.d -o CMakeFiles/groformat.dir/groformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/groformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -MF CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o.d -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lmpdatformat.cpp [ 55%] Linking CXX shared module ../../lib64/maeformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/maeformat.dir/link.txt --verbose=1 [ 55%] Linking CXX shared module ../../lib64/cofformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cofformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gamessukformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Built target gamessukformat /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake "--color=" [ 55%] Linking CXX shared module ../../lib64/fastaformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Linking CXX shared module ../../lib64/fingerprintformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dlpmdformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -MF CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o.d -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lpmdformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/maeformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/maeformat.so CMakeFiles/maeformat.dir/maeformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Built target maeformat /usr/bin/gmake -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fingerprintformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fastaformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmdffformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o -MF CMakeFiles/mdffformat.dir/mdffformat.cpp.o.d -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdffformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Built target fastaformat [ 56%] Built target cofformat /usr/bin/gmake -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake "--color=" [ 56%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmmcifformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -MF CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o.d -o CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmcifformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o [ 56%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/moldenformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmmodformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o -MF CMakeFiles/mmodformat.dir/mmodformat.cpp.o.d -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmodformat.cpp [ 57%] Linking CXX shared module ../../lib64/gromos96format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 [ 58%] Linking CXX shared module ../../lib64/exyzformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gromos96format.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 58%] Built target gromos96format /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 58%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmpdformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o -MF CMakeFiles/mpdformat.dir/mpdformat.cpp.o.d -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpdformat.cpp [ 58%] Linking CXX shared module ../../lib64/fpsformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 58%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o [ 58%] Linking CXX shared module ../../lib64/freefracformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmpqcformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -MF CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o.d -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpqcformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 [ 58%] Linking CXX shared module ../../lib64/fastsearchformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 [ 58%] Linking CXX shared module ../../lib64/ghemicalformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fpsformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 58%] Built target fpsformat /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmsiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o -MF CMakeFiles/msiformat.dir/msiformat.cpp.o.d -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msiformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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-f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/ghemicalformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmsmsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o -MF CMakeFiles/msmsformat.dir/msmsformat.cpp.o.d -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msmsformat.cpp [ 59%] Built target ghemicalformat /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fastsearchformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake "--color=" [ 59%] Built target fastsearchformat /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dopendxformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o -MF CMakeFiles/opendxformat.dir/opendxformat.cpp.o.d -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/opendxformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Doutformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/outformat.dir/outformat.cpp.o -MF CMakeFiles/outformat.dir/outformat.cpp.o.d -o CMakeFiles/outformat.dir/outformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/outformat.cpp [ 59%] Linking CXX shared module ../../lib64/dlpolyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/dlpolyformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Built target dlpolyformat /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Linking CXX shared module ../../lib64/mpdformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 [ 59%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -MF CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o.d -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pcmodelformat.cpp [ 59%] Linking CXX shared module ../../lib64/mpqcformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mpdformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Linking CXX shared module ../../lib64/mmodformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 [ 60%] Built target mpdformat /usr/bin/gmake -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Linking CXX shared module ../../lib64/msmsformat.so /usr/bin/gmake -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -MF CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o.d -o CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mpqcformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Built target mpqcformat /usr/bin/gmake -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -MF CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o.d -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pointcloudformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mmodformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/msmsformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dposformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/posformat.dir/posformat.cpp.o -MF CMakeFiles/posformat.dir/posformat.cpp.o.d -o CMakeFiles/posformat.dir/posformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/posformat.cpp [ 60%] Built target msmsformat /usr/bin/gmake -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake "--color=" 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cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/outformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/outformat.so 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/shelxformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/msiformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm 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/usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 60%] Built target groformat /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake "--color=" [ 60%] Built target msiformat /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 61%] Linking CXX shared module ../../lib64/lmpdatformat.so [ 61%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER 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CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smileyformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 61%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dstlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o -MF CMakeFiles/stlformat.dir/stlformat.cpp.o.d -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/stlformat.cpp [ 62%] Linking CXX shared module ../../lib64/opendxformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/lmpdatformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Built target lmpdatformat /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dthermoformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o -MF CMakeFiles/thermoformat.dir/thermoformat.cpp.o.d -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/thermoformat.cpp [ 63%] Linking CXX shared module ../../lib64/MCDLformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/opendxformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Built target opendxformat /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtinkerformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -MF CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o.d -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/tinkerformat.cpp [ 63%] Linking CXX shared module ../../lib64/moldenformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/MCDLformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so [ 63%] Linking CXX shared module ../../lib64/pcmodelformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 [ 63%] Built target MCDLformat /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dunichemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o -MF CMakeFiles/unichemformat.dir/unichemformat.cpp.o.d -o CMakeFiles/unichemformat.dir/unichemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/unichemformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pcmodelformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/moldenformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Built target pcmodelformat /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend [ 63%] Built target moldenformat /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dviewmolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -MF CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o.d -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/viewmolformat.cpp [ 63%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dwlnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o -MF CMakeFiles/wlnformat.dir/wlnformat.cpp.o.d -o CMakeFiles/wlnformat.dir/wlnformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/wlnformat.cpp [ 64%] Linking CXX shared module ../../lib64/lpmdformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 [ 64%] Linking CXX shared module ../../lib64/pointcloudformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:511:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 511 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:16: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:511:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:528:66: warning: '%-3s' directive output may be truncated writing between 3 and 15 bytes into a region of size 9 [-Wformat-truncation=] 528 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^~~~ ~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:528:29: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 17 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/lpmdformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pointcloudformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 64%] Built target pointcloudformat [ 64%] Built target lpmdformat /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake "--color=" [ 65%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dwlnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -MF CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o.d -o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/wln-nextmove.cpp /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 65%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxedformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o -MF CMakeFiles/xedformat.dir/xedformat.cpp.o.d -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xedformat.cpp [ 66%] Linking CXX shared module ../../lib64/posformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 [ 66%] Linking CXX shared module ../../lib64/mdffformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 [ 67%] Linking CXX shared module ../../lib64/shelxformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/posformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mdffformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Built target posformat /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend [ 67%] Built target mdffformat /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o [ 67%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxyzformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o -MF CMakeFiles/xyzformat.dir/xyzformat.cpp.o.d -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xyzformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dyasaraformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -MF CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o.d -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/shelxformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Built target shelxformat /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Drxnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o -MF CMakeFiles/rxnformat.dir/rxnformat.cpp.o.d -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rxnformat.cpp [ 67%] Linking CXX shared module ../../lib64/stlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 [ 67%] Linking CXX shared module ../../lib64/mmcifformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/stlformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Built target stlformat /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -MF CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o.d -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawcdx.cpp [ 68%] Linking CXX shared module ../../lib64/cifformat.so /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:345:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 345 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:24: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:345:15: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:363:60: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 363 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:363:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mmcifformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Built target mmcifformat /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemkinformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -MF CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o.d -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemkinformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Linking CXX shared module ../../lib64/unichemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 [ 69%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rinchiformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cifformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Built target cifformat /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/unichemformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Built target unichemformat /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend [ 70%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Drsmiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -MF CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o.d -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rsmiformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpng2format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/png2format.dir/png2format.cpp.o -MF CMakeFiles/png2format.dir/png2format.cpp.o.d -o CMakeFiles/png2format.dir/png2format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/png2format.cpp [ 70%] Linking CXX shared module ../../lib64/viewmolformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/viewmolformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Linking CXX shared module ../../lib64/thermoformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 [ 70%] Built target viewmolformat [ 70%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpng2format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -MF CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o.d -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/cairopainter.cpp [ 70%] Linking CXX shared module ../../lib64/tinkerformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 [ 70%] Linking CXX shared module ../../lib64/pqrformat.so [ 70%] Linking CXX shared module ../../lib64/xedformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/thermoformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Built target thermoformat /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/tinkerformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake "--color=" [ 70%] Built target tinkerformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:572:36: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 572 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:34: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:572:15: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 12 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xedformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cdxmlformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Built target xedformat /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake "--color=" [ 70%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -MF CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o.d -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchem_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -MF CMakeFiles/pubchem.dir/xml/pubchem.cpp.o.d -o CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/pubchem.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pqrformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Built target pqrformat [ 71%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchem_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o -MF CMakeFiles/pubchem.dir/xml/xml.cpp.o.d -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp [ 71%] Linking CXX shared module ../../lib64/yasaraformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/yasaraformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Built target yasaraformat [ 72%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -MF CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp [ 73%] Linking CXX shared module ../../lib64/xyzformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 73%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -MF CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o.d -o CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xmlformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xyzformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 73%] Built target xyzformat /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 73%] Linking CXX shared module ../../lib64/rxnformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 [ 74%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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/usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -MF CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o.d -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/chemdoodlejsonformat.cpp [ 74%] Linking CXX shared module ../../lib64/smileyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 [ 74%] Linking CXX shared module ../../lib64/wlnformat.so [ 74%] Linking CXX shared module ../../lib64/rinchiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/wlnformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rinchiformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/smileyformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 74%] Built target smileyformat [ 74%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -MF CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o.d -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/pubchemjsonformat.cpp /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obabel.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/wlnformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/wlnformat.so CMakeFiles/wlnformat.dir/wlnformat.cpp.o "CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/rinchiformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/rinchiformat.so CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 74%] Built target wlnformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 74%] Built target rinchiformat /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build /usr/bin/gmake -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obconformer.dir/DependInfo.cmake "--color=" [ 75%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 75%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obconformer.dir/obconformer.cpp.o -MF CMakeFiles/obconformer.dir/obconformer.cpp.o.d -o CMakeFiles/obconformer.dir/obconformer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obconformer.cpp [ 75%] Linking CXX shared module ../../lib64/rsmiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 [ 75%] Linking CXX shared module ../../lib64/png2format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 [ 75%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o -MF CMakeFiles/cmlformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp [ 75%] Linking CXX shared module ../../lib64/pubchem.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/rsmiformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 75%] Built target rsmiformat /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obenergy.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/png2format.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags 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png2format /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obfit.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 76%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread 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"--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pubchem.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm /usr/lib64/libxml2.so ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 76%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obfitall.dir/obfitall.cpp.o -MF CMakeFiles/obfitall.dir/obfitall.cpp.o.d -o CMakeFiles/obfitall.dir/obfitall.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfitall.cpp [ 76%] Built target pubchem /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obgen.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 76%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgen.cpp [ 76%] Linking CXX shared module ../../lib64/cdxmlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cdxmlformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm /usr/lib64/libxml2.so ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 76%] Built target cdxmlformat /usr/bin/gmake -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 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-I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obminimize.dir/obminimize.cpp.o -MF CMakeFiles/obminimize.dir/obminimize.cpp.o.d -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obminimize.cpp [ 76%] Linking CXX shared module ../../lib64/pdbqtformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pdbqtformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 76%] Built target pdbqtformat [ 76%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -MF CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp [ 77%] Linking CXX executable ../bin/obabel cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obabel.dir/link.d CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Built target obabel /usr/bin/gmake -f tools/CMakeFiles/obmm.dir/build.make 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object tools/CMakeFiles/obmm.dir/obmm.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obmm.dir/obmm.cpp.o -MF CMakeFiles/obmm.dir/obmm.cpp.o.d -o CMakeFiles/obmm.dir/obmm.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obmm.cpp [ 77%] Linking CXX executable ../bin/obenergy cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 [ 77%] Linking CXX shared module ../../lib64/xmlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 [ 77%] Linking CXX executable ../bin/obconformer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 /usr/bin/gmake -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obprobe.dir/DependInfo.cmake "--color=" /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obenergy.dir/link.d CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Built target obenergy /usr/bin/gmake -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obprop.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xmlformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm /usr/lib64/libxml2.so ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Built target xmlformat /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obprop.dir/obprop.cpp.o -MF CMakeFiles/obprop.dir/obprop.cpp.o.d -o CMakeFiles/obprop.dir/obprop.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprop.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 78%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obconformer.dir/link.d CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 78%] Built target obconformer /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend [ 79%] Linking CXX executable ../bin/obgen gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obrotate.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obrotate.dir/obrotate.cpp.o -MF CMakeFiles/obrotate.dir/obrotate.cpp.o.d -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotate.cpp [ 79%] Linking CXX executable ../bin/obminimize cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 [ 79%] Linking CXX shared module ../../lib64/chemdrawcdx.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security 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tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obsym.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obminimize.dir/link.d CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obsym.dir/obsym.cpp.o -MF CMakeFiles/obsym.dir/obsym.cpp.o.d -o CMakeFiles/obsym.dir/obsym.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obsym.cpp [ 79%] Built target obminimize /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdrawcdx.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o -MF CMakeFiles/obtautomer.dir/obtautomer.cpp.o.d -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obtautomer.cpp [ 79%] Built target chemdrawcdx /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obthermo.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obthermo.dir/obthermo.cpp.o -MF CMakeFiles/obthermo.dir/obthermo.cpp.o.d -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obthermo.cpp [ 79%] Linking CXX executable ../bin/obfitall cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obfitall.dir/link.d CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Linking CXX executable ../bin/obfit cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 [ 79%] Built target obfitall /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obgrep.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obgrep.dir/obgrep.cpp.o -MF CMakeFiles/obgrep.dir/obgrep.cpp.o.d -o CMakeFiles/obgrep.dir/obgrep.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgrep.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obfit.dir/link.d CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Built target obfit /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -MF CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o.d -o CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obspectrophore.cpp /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o -MF CMakeFiles/obgui.dir/OBGUI.cpp.o.d -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp [ 79%] Linking CXX executable ../bin/obsym cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 [ 80%] Linking CXX executable ../bin/obtautomer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obsym.dir/link.d CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 80%] Built target obsym /usr/bin/gmake -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test/CMakeFiles/test_runner.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obtautomer.dir/link.d CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/test_runner.cpp.o -MF CMakeFiles/test_runner.dir/test_runner.cpp.o.d -o CMakeFiles/test_runner.dir/test_runner.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test/test_runner.cpp [ 81%] Linking CXX executable ../bin/obthermo cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 [ 81%] Built target obtautomer /usr/bin/gmake -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -MF CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o.d -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/inchiwrite.cpp [ 82%] Linking CXX executable ../bin/obmm cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obthermo.dir/link.d CMakeFiles/obthermo.dir/obthermo.cpp.o -o ../bin/obthermo -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Built target obthermo [ 82%] Linking CXX shared module ../../lib64/cmlreactformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 [ 82%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o -MF CMakeFiles/obgui.dir/stdwx.cpp.o.d -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/stdwx.cpp [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/aliastest.cpp.o -MF CMakeFiles/test_runner.dir/aliastest.cpp.o.d -o CMakeFiles/test_runner.dir/aliastest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/aliastest.cpp [ 82%] Linking CXX executable ../bin/obprop cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obmm.dir/link.d CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Built target obmm [ 82%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -MF CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o.d -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/getinchi.cpp [ 82%] Linking CXX executable ../bin/obprobe cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cmlreactformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm /usr/lib64/libxml2.so ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obprop.dir/link.d CMakeFiles/obprop.dir/obprop.cpp.o -o ../bin/obprop -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Built target cmlreactformat /usr/bin/gmake -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test/CMakeFiles/roundtrip.dir/DependInfo.cmake "--color=" [ 82%] Built target obprop gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o -MF CMakeFiles/test_runner.dir/automorphismtest.cpp.o.d -o CMakeFiles/test_runner.dir/automorphismtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/automorphismtest.cpp [ 82%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o -MF CMakeFiles/roundtrip.dir/roundtrip.cpp.o.d -o CMakeFiles/roundtrip.dir/roundtrip.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/roundtrip.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obprobe.dir/link.d CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Built target obprobe /usr/bin/gmake -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Generating /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp, /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel.py cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/swig -python -c++ -small -O -templatereduce -naturalvar -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp -outdir /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/openbabel-python.i [ 83%] Linking CXX executable ../bin/obrotamer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 [ 83%] Linking CXX executable ../bin/obrotate cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 [ 83%] Linking CXX executable ../bin/obgrep cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obrotate.dir/link.d CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obrotamer.dir/link.d CMakeFiles/obrotamer.dir/obrotamer.cpp.o -o ../bin/obrotamer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Built target obrotate [ 83%] Linking CXX shared module ../../lib64/chemkinformat.so [ 83%] Built target obrotamer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 /usr/bin/gmake -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Generating /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp [ 84%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/swig -perl5 -c++ -small -O -templatereduce -naturalvar -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp -outdir /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/openbabel-perl.i cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o -MF CMakeFiles/obgui.dir/optswx.cpp.o.d -o CMakeFiles/obgui.dir/optswx.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/optswx.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obgrep.dir/link.d CMakeFiles/obgrep.dir/obgrep.cpp.o -o ../bin/obgrep -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Built target obgrep [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/buildertest.cpp.o -MF CMakeFiles/test_runner.dir/buildertest.cpp.o.d -o CMakeFiles/test_runner.dir/buildertest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/buildertest.cpp [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -MF CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o.d -o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/canonconsistenttest.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemkinformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Built target chemkinformat [ 84%] Linking CXX executable ../bin/test_inchiwrite /usr/bin/gmake -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Generating /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/swig -ruby -c++ -small -O -templatereduce -naturalvar -autorename -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.txt /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/openbabel-ruby.i /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/test_inchiwrite.dir/link.d CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -o ../bin/test_inchiwrite -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64 ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Built target test_inchiwrite [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o -MF CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o.d -o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/canonfragmenttest.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:368: Warning 325: Nested struct not currently supported (StreamState ignored) [ 85%] Linking CXX executable ../bin/roundtrip cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 [ 86%] Linking CXX executable ../bin/obspectrophore cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:368: Warning 325: Nested struct not currently supported (StreamState ignored) /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/isomorphism.h:160: Warning 325: Nested class not currently supported (Functor ignored) /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/roundtrip.dir/link.d CMakeFiles/roundtrip.dir/roundtrip.cpp.o -o ../bin/roundtrip -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obspectrophore.dir/link.d CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 86%] Built target obspectrophore [ 86%] Built target roundtrip [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/spectrophore.h:571: Warning 312: Nested struct not currently supported (ignored). /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:368: Warning 325: Nested struct not currently supported (StreamState ignored) /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/spectrophore.h:578: Warning 312: Nested struct not currently supported (ignored). cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o -MF CMakeFiles/test_runner.dir/canonstabletest.cpp.o.d -o CMakeFiles/test_runner.dir/canonstabletest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/canonstabletest.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o -MF CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o.d -o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/carspacegrouptest.cpp [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o -MF CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o.d -o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/cifspacegrouptest.cpp [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/cistranstest.cpp.o -MF CMakeFiles/test_runner.dir/cistranstest.cpp.o.d -o CMakeFiles/test_runner.dir/cistranstest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/cistranstest.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/isomorphism.h:160: Warning 325: Nested class not currently supported (Functor ignored) [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/conversiontest.cpp.o -MF CMakeFiles/test_runner.dir/conversiontest.cpp.o.d -o CMakeFiles/test_runner.dir/conversiontest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/conversiontest.cpp [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::OnConvert(wxCommandEvent&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp:589:9: warning: ignoring return value of 'std::__cxx11::basic_istringstream<_CharT, _Traits, _Alloc>::__string_type std::__cxx11::basic_istringstream<_CharT, _Traits, _Alloc>::str() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator; __string_type = std::__cxx11::basic_string]', declared with attribute 'nodiscard' [-Wunused-result] 589 | ss.str(); | ~~~~~~^~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp:23: /usr/include/c++/15/sstream:713:7: note: declared here 713 | str() const _GLIBCXX_LVAL_REF_QUAL | ^~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o -MF CMakeFiles/test_runner.dir/graphsymtest.cpp.o.d -o CMakeFiles/test_runner.dir/graphsymtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/graphsymtest.cpp [ 88%] Linking CXX shared module ../../lib64/chemdoodlejsonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdoodlejsonformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Built target chemdoodlejsonformat [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/gziptest.cpp.o -MF CMakeFiles/test_runner.dir/gziptest.cpp.o.d -o CMakeFiles/test_runner.dir/gziptest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/gziptest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/addhtest.cpp.o -MF CMakeFiles/test_runner.dir/addhtest.cpp.o.d -o CMakeFiles/test_runner.dir/addhtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/addhtest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o -MF CMakeFiles/test_runner.dir/implicitHtest.cpp.o.d -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/implicitHtest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/lssrtest.cpp.o -MF CMakeFiles/test_runner.dir/lssrtest.cpp.o.d -o CMakeFiles/test_runner.dir/lssrtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/lssrtest.cpp [ 89%] Linking CXX shared module ../../lib64/cmlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o -MF CMakeFiles/test_runner.dir/isomorphismtest.cpp.o.d -o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/isomorphismtest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/multicmltest.cpp.o -MF CMakeFiles/test_runner.dir/multicmltest.cpp.o.d -o CMakeFiles/test_runner.dir/multicmltest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/multicmltest.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cmlformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm /usr/lib64/libxml2.so ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 89%] Built target cmlformat [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/periodictest.cpp.o -MF CMakeFiles/test_runner.dir/periodictest.cpp.o.d -o CMakeFiles/test_runner.dir/periodictest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/periodictest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/regressionstest.cpp.o -MF CMakeFiles/test_runner.dir/regressionstest.cpp.o.d -o CMakeFiles/test_runner.dir/regressionstest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/regressionstest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/rotortest.cpp.o -MF CMakeFiles/test_runner.dir/rotortest.cpp.o.d -o CMakeFiles/test_runner.dir/rotortest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/rotortest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/shuffletest.cpp.o -MF CMakeFiles/test_runner.dir/shuffletest.cpp.o.d -o CMakeFiles/test_runner.dir/shuffletest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/shuffletest.cpp [ 90%] Linking CXX shared module ../../lib64/pubchemjsonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/smilestest.cpp.o -MF CMakeFiles/test_runner.dir/smilestest.cpp.o.d -o CMakeFiles/test_runner.dir/smilestest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/smilestest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o -MF CMakeFiles/test_runner.dir/spectrophoretest.cpp.o.d -o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/spectrophoretest.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pubchemjsonformat.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../../lib64/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so /usr/lib64/libcairo.so /usr/lib64/libinchi.so -lm ../../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 90%] Built target pubchemjsonformat [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o -MF CMakeFiles/test_runner.dir/squareplanartest.cpp.o.d -o CMakeFiles/test_runner.dir/squareplanartest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/squareplanartest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/stereotest.cpp.o -MF CMakeFiles/test_runner.dir/stereotest.cpp.o.d -o CMakeFiles/test_runner.dir/stereotest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/stereotest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o -MF CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o.d -o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/stereoperceptiontest.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 91%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbindings_perl_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/python3.13 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -MF CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o.d -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/tautomertest.cpp.o -MF CMakeFiles/test_runner.dir/tautomertest.cpp.o.d -o CMakeFiles/test_runner.dir/tautomertest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/tautomertest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o -MF CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o.d -o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/tetrahedraltest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o -MF CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o.d -o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/tetranonplanartest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o -MF CMakeFiles/test_runner.dir/tetraplanartest.cpp.o.d -o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/tetraplanartest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o -MF CMakeFiles/test_runner.dir/uniqueidtest.cpp.o.d -o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/uniqueidtest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/maereadertest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/maereadertest.cpp.o -MF CMakeFiles/test_runner.dir/maereadertest.cpp.o.d -o CMakeFiles/test_runner.dir/maereadertest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/maereadertest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/aromatest.cpp.o -MF CMakeFiles/test_runner.dir/aromatest.cpp.o.d -o CMakeFiles/test_runner.dir/aromatest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/aromatest.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbindings_python_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/python3.13 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -MF CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o.d -o CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp In file included from /usr/include/python3.13/pyconfig.h:6, from /usr/include/python3.13/Python.h:14, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:207: /usr/include/python3.13/pyconfig-64.h:1959:9: warning: '_LARGEFILE_SOURCE' redefined 1959 | #define _LARGEFILE_SOURCE 1 | ^~~~~~~~~~~~~~~~~ : note: this is the location of the previous definition cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && sed -e 's/rb_define_module("Openbabel")/rb_define_module("OpenBabel")/' -e's/void Init_OpenBabel/void Init_openbabel/' /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/atom.cpp.o -MF CMakeFiles/test_runner.dir/atom.cpp.o.d -o CMakeFiles/test_runner.dir/atom.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/atom.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/bond.cpp.o -MF CMakeFiles/test_runner.dir/bond.cpp.o.d -o CMakeFiles/test_runner.dir/bond.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/bond.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E remove /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.txt [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/cansmi.cpp.o -MF CMakeFiles/test_runner.dir/cansmi.cpp.o.d -o CMakeFiles/test_runner.dir/cansmi.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/cansmi.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake "--color=" [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -MF CMakeFiles/test_runner.dir/charge_mmff94.cpp.o.d -o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/charge_mmff94.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -MF CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o.d -o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/charge_gasteiger.cpp [ 95%] Building CXX object scripts/CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/conversion.cpp.o -MF CMakeFiles/test_runner.dir/conversion.cpp.o.d -o CMakeFiles/test_runner.dir/conversion.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/conversion.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbindings_ruby_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/python3.13 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT scripts/CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o -MF CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o.d -o CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/datatest.cpp.o -MF CMakeFiles/test_runner.dir/datatest.cpp.o.d -o CMakeFiles/test_runner.dir/datatest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/datatest.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/ffgaff.cpp.o -MF CMakeFiles/test_runner.dir/ffgaff.cpp.o.d -o CMakeFiles/test_runner.dir/ffgaff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/ffgaff.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/ffghemical.cpp.o -MF CMakeFiles/test_runner.dir/ffghemical.cpp.o.d -o CMakeFiles/test_runner.dir/ffghemical.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/ffghemical.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o -MF CMakeFiles/test_runner.dir/ffmmff94.cpp.o.d -o CMakeFiles/test_runner.dir/ffmmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/ffmmff94.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/ffuff.cpp.o -MF CMakeFiles/test_runner.dir/ffuff.cpp.o.d -o CMakeFiles/test_runner.dir/ffuff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/ffuff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/formalcharge.cpp.o -MF CMakeFiles/test_runner.dir/formalcharge.cpp.o.d -o CMakeFiles/test_runner.dir/formalcharge.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/formalcharge.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/format.cpp.o -MF CMakeFiles/test_runner.dir/format.cpp.o.d -o CMakeFiles/test_runner.dir/format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/format.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/formula.cpp.o -MF CMakeFiles/test_runner.dir/formula.cpp.o.d -o CMakeFiles/test_runner.dir/formula.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/formula.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/internalcoord.cpp.o -MF CMakeFiles/test_runner.dir/internalcoord.cpp.o.d -o CMakeFiles/test_runner.dir/internalcoord.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/internalcoord.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o -MF CMakeFiles/test_runner.dir/invalidsmarts.cpp.o.d -o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/invalidsmarts.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o -MF CMakeFiles/test_runner.dir/invalidsmiles.cpp.o.d -o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/invalidsmiles.cpp [ 97%] Linking CXX executable ../../bin/obgui cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/iterators.cpp.o -MF CMakeFiles/test_runner.dir/iterators.cpp.o.d -o CMakeFiles/test_runner.dir/iterators.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/iterators.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/logp_psa.cpp.o -MF CMakeFiles/test_runner.dir/logp_psa.cpp.o.d -o CMakeFiles/test_runner.dir/logp_psa.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/logp_psa.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/math.cpp.o -MF CMakeFiles/test_runner.dir/math.cpp.o.d -o CMakeFiles/test_runner.dir/math.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/math.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/mol.cpp.o -MF CMakeFiles/test_runner.dir/mol.cpp.o.d -o CMakeFiles/test_runner.dir/mol.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/mol.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o -MF CMakeFiles/test_runner.dir/pdbreadfile.cpp.o.d -o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/pdbreadfile.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/phmodel.cpp.o -MF CMakeFiles/test_runner.dir/phmodel.cpp.o.d -o CMakeFiles/test_runner.dir/phmodel.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/phmodel.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/residue.cpp.o -MF CMakeFiles/test_runner.dir/residue.cpp.o.d -o CMakeFiles/test_runner.dir/residue.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/residue.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/ringtest.cpp.o -MF CMakeFiles/test_runner.dir/ringtest.cpp.o.d -o CMakeFiles/test_runner.dir/ringtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/ringtest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/smartstest.cpp.o -MF CMakeFiles/test_runner.dir/smartstest.cpp.o.d -o CMakeFiles/test_runner.dir/smartstest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/smartstest.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/smartsparse.cpp.o -MF CMakeFiles/test_runner.dir/smartsparse.cpp.o.d -o CMakeFiles/test_runner.dir/smartsparse.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/smartsparse.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--dependency-file=CMakeFiles/obgui.dir/link.d CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../../lib64/libopenbabel.so.7.0.0 -L/usr/lib64 -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 99%] Built target obgui [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o -MF CMakeFiles/test_runner.dir/smilesmatch.cpp.o.d -o CMakeFiles/test_runner.dir/smilesmatch.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/smilesmatch.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/unitcell.cpp.o -MF CMakeFiles/test_runner.dir/unitcell.cpp.o.d -o CMakeFiles/test_runner.dir/unitcell.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/unitcell.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/cmlreadfile.cpp.o -MF CMakeFiles/test_runner.dir/cmlreadfile.cpp.o.d -o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/cmlreadfile.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/g++ -DFORMATDIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64//\" -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtest_runner_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT test/CMakeFiles/test_runner.dir/obtest.cpp.o -MF CMakeFiles/test_runner.dir/obtest.cpp.o.d -o CMakeFiles/test_runner.dir/obtest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/test/obtest.cpp [100%] Linking CXX executable ../bin/test_runner cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_runner.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,--export-dynamic -rdynamic -Wl,--dependency-file=CMakeFiles/test_runner.dir/link.d CMakeFiles/test_runner.dir/test_runner.cpp.o CMakeFiles/test_runner.dir/aliastest.cpp.o CMakeFiles/test_runner.dir/automorphismtest.cpp.o CMakeFiles/test_runner.dir/buildertest.cpp.o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o CMakeFiles/test_runner.dir/canonstabletest.cpp.o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cistranstest.cpp.o CMakeFiles/test_runner.dir/conversiontest.cpp.o CMakeFiles/test_runner.dir/graphsymtest.cpp.o CMakeFiles/test_runner.dir/gziptest.cpp.o CMakeFiles/test_runner.dir/addhtest.cpp.o CMakeFiles/test_runner.dir/implicitHtest.cpp.o CMakeFiles/test_runner.dir/lssrtest.cpp.o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o CMakeFiles/test_runner.dir/multicmltest.cpp.o CMakeFiles/test_runner.dir/periodictest.cpp.o CMakeFiles/test_runner.dir/regressionstest.cpp.o CMakeFiles/test_runner.dir/rotortest.cpp.o CMakeFiles/test_runner.dir/shuffletest.cpp.o CMakeFiles/test_runner.dir/smilestest.cpp.o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o CMakeFiles/test_runner.dir/squareplanartest.cpp.o CMakeFiles/test_runner.dir/stereotest.cpp.o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o CMakeFiles/test_runner.dir/tautomertest.cpp.o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o CMakeFiles/test_runner.dir/maereadertest.cpp.o CMakeFiles/test_runner.dir/aromatest.cpp.o CMakeFiles/test_runner.dir/atom.cpp.o CMakeFiles/test_runner.dir/bond.cpp.o CMakeFiles/test_runner.dir/cansmi.cpp.o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o CMakeFiles/test_runner.dir/conversion.cpp.o CMakeFiles/test_runner.dir/datatest.cpp.o CMakeFiles/test_runner.dir/ffgaff.cpp.o CMakeFiles/test_runner.dir/ffghemical.cpp.o CMakeFiles/test_runner.dir/ffmmff94.cpp.o CMakeFiles/test_runner.dir/ffuff.cpp.o CMakeFiles/test_runner.dir/formalcharge.cpp.o CMakeFiles/test_runner.dir/format.cpp.o CMakeFiles/test_runner.dir/formula.cpp.o CMakeFiles/test_runner.dir/internalcoord.cpp.o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o CMakeFiles/test_runner.dir/iterators.cpp.o CMakeFiles/test_runner.dir/logp_psa.cpp.o CMakeFiles/test_runner.dir/math.cpp.o CMakeFiles/test_runner.dir/mol.cpp.o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o CMakeFiles/test_runner.dir/phmodel.cpp.o CMakeFiles/test_runner.dir/residue.cpp.o CMakeFiles/test_runner.dir/ringtest.cpp.o CMakeFiles/test_runner.dir/smartstest.cpp.o CMakeFiles/test_runner.dir/smartsparse.cpp.o CMakeFiles/test_runner.dir/smilesmatch.cpp.o CMakeFiles/test_runner.dir/unitcell.cpp.o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o CMakeFiles/test_runner.dir/obtest.cpp.o -o ../bin/test_runner -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64 ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target test_runner [100%] Linking CXX shared module /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/_openbabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_python.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/_openbabel.so "CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libpython3.13.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_python [100%] Linking CXX shared module ../lib64/openbabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_ruby.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_ruby.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/openbabel.so "CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libruby.so ../lib64/libopenbabel.so.7.0.0 /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_ruby [100%] Linking CXX shared module ../lib64/OpenBabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_perl.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_perl.dir/link.d -shared -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ../lib64/OpenBabel.so "CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: /usr/lib64/libperl.so ../lib64/libopenbabel.so.7.0.0 -lpthread -ldl -lm -lcrypt -lutil -lc /usr/lib64/libmaeparser.so /usr/lib64/libcoordgen.so -lm -ldl /usr/lib64/libz.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_perl gmake[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/cmake -E cmake_progress_start /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.nuMbsL + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + '[' 1 -eq 1 ']' + '[' /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT '!=' / ']' + rm -rf /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT ++ dirname /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + mkdir -p /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + mkdir /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd openbabel-3.1.1 + '[' 1 -eq 1 ']' + touch scripts/CMakeLists.txt + DESTDIR=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + /usr/bin/cmake --install build -- Install configuration: "RelWithDebInfo" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/babelconfig.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/pkgconfig/openbabel-3.pc -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3_EXPORTS.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3_EXPORTS-relwithdebinfo.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3Config.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3ConfigVersion.cmake -- Installing: 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Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/gamessukformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/orcaformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/orcaformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/APIInterface.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/APIInterface.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/CSRformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/CSRformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/PQSformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/PQSformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/MCDLformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/MCDLformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/alchemyformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/alchemyformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/acrformat.so -- Set non-toolchain portion of runtime path of 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Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/boxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacaoformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacaoformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacheformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacheformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/carformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/carformat.so" to "" -- Installing: 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"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemtoolformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cifformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cifformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cofformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cofformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/crkformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/crkformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cssrformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cssrformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/dlpolyformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/dlpolyformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/exyzformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/exyzformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fastsearchformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fastsearchformat.so" to "" -- Installing: 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"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fingerprintformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fpsformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fpsformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/freefracformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/freefracformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/ghemicalformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/ghemicalformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/gromos96format.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/gromos96format.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/groformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/groformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lmpdatformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lmpdatformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lpmdformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lpmdformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mdffformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mdffformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmcifformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmcifformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmodformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmodformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/moldenformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/moldenformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mpdformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mpdformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mpqcformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mpqcformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msmsformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msmsformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/opendxformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/opendxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/outformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/outformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pcmodelformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pcmodelformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pdbqtformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pdbqtformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pointcloudformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pointcloudformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/posformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/posformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pqrformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pqrformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/shelxformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/shelxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/smileyformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/smileyformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/stlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/stlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/thermoformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/thermoformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/tinkerformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/tinkerformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/unichemformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/unichemformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/viewmolformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/viewmolformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/wlnformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/wlnformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xedformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xedformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xyzformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xyzformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/yasaraformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/yasaraformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rxnformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rxnformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdrawcdx.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdrawcdx.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemkinformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemkinformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rinchiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rinchiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rsmiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rsmiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/png2format.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/png2format.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cdxmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cdxmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchem.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchem.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlreactformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlreactformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdoodlejsonformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdoodlejsonformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchemjsonformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchemjsonformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obabel -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obabel" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obconformer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obconformer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obenergy -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obenergy" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfit -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfit" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfitall -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfitall" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgen -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgen" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obminimize -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obminimize" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obmm -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obmm" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprobe -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprobe" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprop -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprop" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotamer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotamer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotate -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotate" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obsym -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obsym" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obtautomer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obtautomer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obthermo -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obthermo" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgrep -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgrep" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obspectrophore -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obspectrophore" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgui -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgui" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/roundtrip -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/roundtrip" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/_openbabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/_openbabel.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/__init__.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/openbabel.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/pybel.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/Chemistry/OpenBabel.pm -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/ruby/vendor_ruby/openbabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/ruby/vendor_ruby/openbabel.so" to "" + chmod 0755 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so + desktop-file-install --dir=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/applications /home/pterjan/rpmbuild/SOURCES/openbabelgui.desktop + install -Dpm644 babel.png /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/icons/hicolor/32x32/apps/babel.png + /usr/bin/find-debuginfo -j16 --strict-build-id -m -i --build-id-seed 3.1.1-24.mga10 --unique-debug-suffix -3.1.1-24.mga10.x86_64 --unique-debug-src-base openbabel-3.1.1-24.mga10.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 find-debuginfo: starting Extracting debug info from 149 files DWARF-compressing 149 files sepdebugcrcfix: Updated 149 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/openbabel-3.1.1-24.mga10.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + '[' -n '' ']' + /usr/share/spec-helper/clean_files + '[' -n '' ']' + /usr/share/spec-helper/compress_files .xz + '[' -n '' ']' + /usr/share/spec-helper/relink_symlinks + '[' -n '' ']' + /usr/share/spec-helper/clean_perl + '[' -n '' ']' + /usr/share/spec-helper/lib_symlinks + '[' -n '' ']' + /usr/share/spec-helper/gprintify + '[' -n '' ']' + /usr/share/spec-helper/fix_mo + '[' -n '' ']' + /usr/share/spec-helper/fix_pamd + '[' -n '' ']' + /usr/share/spec-helper/remove_info_dir + '[' -n '' ']' + /usr/share/spec-helper/fix_eol + '[' -n '' ']' + /usr/share/spec-helper/check_desktop_files /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/applications/openbabelgui.desktop: hint: value "Education;Science;Chemistry;Physics;Biology;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu + '[' -n '' ']' + /usr/share/spec-helper/check_elf_files + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-mangle-shebangs + env -u SOURCE_DATE_EPOCH /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j16 Bytecompiling .py files below /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Not clamping source mtimes, $SOURCE_DATE_EPOCH not set Bytecompiling .py files below /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Not clamping source mtimes, $SOURCE_DATE_EPOCH not set + /usr/lib/rpm/redhat/brp-python-hardlink Reading /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.8nNsdS + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd openbabel-3.1.1 + '[' 1 -eq 1 ']' + rm -f build/lib64/openbabel.so + export CTEST_OUTPUT_ON_FAILURE=1 + CTEST_OUTPUT_ON_FAILURE=1 + export PYTHONPATH=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages + PYTHONPATH=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages + cd build + /usr/bin/ctest --output-on-failure --force-new-ctest-process -j16 Test project /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build Start 1: test_alias_1 Start 2: test_automorphism_1 Start 3: test_automorphism_2 Start 4: test_automorphism_3 Start 5: test_automorphism_4 Start 6: test_automorphism_5 Start 7: test_automorphism_6 Start 8: test_automorphism_7 Start 9: test_automorphism_8 Start 10: test_automorphism_9 Start 11: test_automorphism_10 Start 12: test_builder_1 Start 13: test_builder_2 Start 14: test_builder_3 Start 15: test_builder_4 Start 16: test_builder_5 1/224 Test #2: test_automorphism_1 .............. Passed 0.03 sec Start 17: test_builder_6 2/224 Test #3: test_automorphism_2 .............. Passed 0.03 sec Start 18: test_canonconsistent_1 3/224 Test #1: test_alias_1 ..................... Passed 0.04 sec 4/224 Test #4: test_automorphism_3 .............. Passed 0.03 sec 5/224 Test #5: test_automorphism_4 .............. Passed 0.03 sec Start 19: test_canonconsistent_2 Start 20: test_canonconsistent_3 Start 21: test_canonfragment_1 6/224 Test #6: test_automorphism_5 .............. Passed 0.04 sec 7/224 Test #7: test_automorphism_6 .............. Passed 0.04 sec 8/224 Test #8: test_automorphism_7 .............. Passed 0.03 sec 9/224 Test #9: test_automorphism_8 .............. Passed 0.03 sec Start 22: test_canonstable_1 Start 23: test_carspacegroup_1 Start 24: test_carspacegroup_2 Start 25: test_carspacegroup_3 10/224 Test #10: test_automorphism_9 .............. Passed 0.04 sec 11/224 Test #11: test_automorphism_10 ............. Passed 0.04 sec Start 26: test_carspacegroup_4 Start 27: test_cifspacegroup_1 12/224 Test #19: test_canonconsistent_2 ........... Passed 0.03 sec Start 28: test_cifspacegroup_2 13/224 Test #14: test_builder_3 ................... Passed 0.12 sec 14/224 Test #15: test_builder_4 ................... Passed 0.12 sec 15/224 Test #16: test_builder_5 ................... Passed 0.12 sec 16/224 Test #17: test_builder_6 ................... Passed 0.11 sec 17/224 Test #21: test_canonfragment_1 ............. Passed 0.10 sec Start 29: test_cifspacegroup_3 Start 30: test_cifspacegroup_4 Start 31: test_cifspacegroup_5 Start 32: test_cifspacegroup_6 Start 33: test_cifspacegroup_7 18/224 Test #23: test_carspacegroup_1 ............. Passed 0.10 sec 19/224 Test #29: test_cifspacegroup_3 ............. Passed 0.01 sec Start 34: test_cifspacegroup_8 Start 35: test_cifspacegroup_9 20/224 Test #20: test_canonconsistent_3 ........... Passed 0.12 sec Start 36: test_cifspacegroup_10 21/224 Test #18: test_canonconsistent_1 ........... Passed 0.12 sec Start 37: test_cifspacegroup_11 22/224 Test #13: test_builder_2 ................... Passed 0.21 sec Start 38: test_cifspacegroup_12 23/224 Test #27: test_cifspacegroup_1 ............. Passed 0.18 sec Start 39: test_cifspacegroup_13 24/224 Test #24: test_carspacegroup_2 ............. Passed 0.19 sec 25/224 Test #26: test_carspacegroup_4 ............. Passed 0.19 sec Start 40: test_cistrans_1 Start 41: test_cistrans_2 26/224 Test #25: test_carspacegroup_3 ............. Passed 0.19 sec Start 42: test_cistrans_3 27/224 Test #40: test_cistrans_1 .................. Passed 0.00 sec Start 43: test_cistrans_4 28/224 Test #41: test_cistrans_2 .................. Passed 0.00 sec Start 44: test_cistrans_5 29/224 Test #42: test_cistrans_3 .................. Passed 0.01 sec Start 45: test_cistrans_6 30/224 Test #43: test_cistrans_4 .................. Passed 0.00 sec Start 46: test_cistrans_7 31/224 Test #44: test_cistrans_5 .................. Passed 0.00 sec Start 47: test_cistrans_8 32/224 Test #28: test_cifspacegroup_2 ............. Passed 0.13 sec Start 48: test_cistrans_9 33/224 Test #31: test_cifspacegroup_5 ............. Passed 0.13 sec Start 49: test_conversion_1 34/224 Test #30: test_cifspacegroup_4 ............. Passed 0.13 sec Start 50: test_graphsym_1 35/224 Test #32: test_cifspacegroup_6 ............. Passed 0.13 sec Start 51: test_graphsym_2 36/224 Test #45: test_cistrans_6 .................. Passed 0.03 sec Start 52: test_graphsym_3 37/224 Test #33: test_cifspacegroup_7 ............. Passed 0.13 sec Start 53: test_graphsym_4 38/224 Test #35: test_cifspacegroup_9 ............. Passed 0.13 sec 39/224 Test #46: test_cistrans_7 .................. Passed 0.03 sec Start 54: test_graphsym_5 Start 55: test_gzip_1 40/224 Test #34: test_cifspacegroup_8 ............. Passed 0.13 sec 41/224 Test #36: test_cifspacegroup_10 ............ Passed 0.13 sec 42/224 Test #47: test_cistrans_8 .................. Passed 0.04 sec Start 56: test_addh_1 Start 57: test_implicitH_1 Start 58: test_lssr_1 43/224 Test #39: test_cifspacegroup_13 ............ Passed 0.05 sec Start 59: test_lssr_2 44/224 Test #37: test_cifspacegroup_11 ............ Passed 0.13 sec Start 60: test_lssr_3 45/224 Test #48: test_cistrans_9 .................. Passed 0.03 sec Start 61: test_lssr_4 46/224 Test #49: test_conversion_1 ................ Passed 0.03 sec Start 62: test_lssr_5 47/224 Test #51: test_graphsym_2 .................. Passed 0.03 sec Start 63: test_isomorphism_1 48/224 Test #50: test_graphsym_1 .................. Passed 0.04 sec Start 64: test_isomorphism_2 49/224 Test #53: test_graphsym_4 .................. Passed 0.03 sec Start 65: test_isomorphism_3 50/224 Test #52: test_graphsym_3 .................. Passed 0.04 sec 51/224 Test #54: test_graphsym_5 .................. Passed 0.03 sec Start 66: test_isomorphism_4 Start 67: test_isomorphism_5 52/224 Test #57: test_implicitH_1 ................. Passed 0.03 sec Start 68: test_isomorphism_6 53/224 Test #64: test_isomorphism_2 ............... Passed 0.03 sec Start 69: test_isomorphism_7 54/224 Test #62: test_lssr_5 ...................... Passed 0.04 sec 55/224 Test #63: test_isomorphism_1 ............... Passed 0.04 sec Start 70: test_isomorphism_8 Start 71: test_isomorphism_9 56/224 Test #58: test_lssr_1 ...................... Passed 0.06 sec 57/224 Test #65: test_isomorphism_3 ............... Passed 0.04 sec 58/224 Test #66: test_isomorphism_4 ............... Passed 0.03 sec Start 72: test_multicml_1 Start 73: test_periodic_1 Start 74: test_periodic_2 59/224 Test #38: test_cifspacegroup_12 ............ Passed 0.13 sec 60/224 Test #67: test_isomorphism_5 ............... Passed 0.04 sec 61/224 Test #68: test_isomorphism_6 ............... Passed 0.03 sec Start 75: test_periodic_3 Start 76: test_periodic_4 Start 77: test_regressions_1 62/224 Test #73: test_periodic_1 .................. Passed 0.01 sec 63/224 Test #74: test_periodic_2 .................. Passed 0.01 sec Start 78: test_regressions_221 Start 79: test_regressions_222 64/224 Test #76: test_periodic_4 .................. Passed 0.01 sec Start 80: test_regressions_223 65/224 Test #69: test_isomorphism_7 ............... Passed 0.04 sec Start 81: test_regressions_224 66/224 Test #70: test_isomorphism_8 ............... Passed 0.03 sec 67/224 Test #71: test_isomorphism_9 ............... Passed 0.03 sec Start 82: test_regressions_225 Start 83: test_regressions_226 68/224 Test #72: test_multicml_1 .................. Passed 0.03 sec Start 84: test_regressions_227 69/224 Test #75: test_periodic_3 .................. Passed 0.03 sec Start 85: test_regressions_228 70/224 Test #77: test_regressions_1 ............... Passed 0.03 sec Start 86: test_regressions_240 71/224 Test #55: test_gzip_1 ...................... Passed 0.11 sec Start 87: test_regressions_241 72/224 Test #78: test_regressions_221 ............. Passed 0.03 sec 73/224 Test #80: test_regressions_223 ............. Passed 0.03 sec Start 88: test_regressions_242 Start 89: test_regressions_1794 74/224 Test #79: test_regressions_222 ............. Passed 0.04 sec Start 90: test_regressions_2111 75/224 Test #82: test_regressions_225 ............. Passed 0.03 sec Start 91: test_rotor_1 76/224 Test #81: test_regressions_224 ............. Passed 0.04 sec 77/224 Test #84: test_regressions_227 ............. Passed 0.03 sec Start 92: test_rotor_2 Start 93: test_rotor_3 78/224 Test #83: test_regressions_226 ............. Passed 0.04 sec 79/224 Test #91: test_rotor_1 ..................... Passed 0.01 sec Start 94: test_rotor_4 Start 95: test_shuffle_1 80/224 Test #85: test_regressions_228 ............. Passed 0.03 sec Start 96: test_shuffle_2 81/224 Test #86: test_regressions_240 ............. Passed 0.03 sec 82/224 Test #87: test_regressions_241 ............. Passed 0.03 sec Start 97: test_shuffle_3 Start 98: test_shuffle_4 83/224 Test #88: test_regressions_242 ............. Passed 0.03 sec Start 99: test_shuffle_5 84/224 Test #89: test_regressions_1794 ............ Passed 0.03 sec Start 100: test_smiles_1 85/224 Test #90: test_regressions_2111 ............ Passed 0.03 sec Start 101: test_smiles_2 86/224 Test #92: test_rotor_2 ..................... Passed 0.03 sec Start 102: test_smiles_3 87/224 Test #93: test_rotor_3 ..................... Passed 0.03 sec Start 103: test_spectrophore_1 88/224 Test #94: test_rotor_4 ..................... Passed 0.04 sec Start 104: test_spectrophore_2 89/224 Test #100: test_smiles_1 .................... Passed 0.03 sec 90/224 Test #101: test_smiles_2 .................... Passed 0.03 sec Start 105: test_spectrophore_3 Start 106: test_spectrophore_4 91/224 Test #98: test_shuffle_4 ................... Passed 0.04 sec Start 107: test_spectrophore_5 92/224 Test #104: test_spectrophore_2 .............. Passed 0.01 sec Start 108: test_squareplanar_1 93/224 Test #105: test_spectrophore_3 .............. Passed 0.01 sec Start 109: test_squareplanar_2 94/224 Test #108: test_squareplanar_1 .............. Passed 0.01 sec Start 110: test_squareplanar_3 95/224 Test #106: test_spectrophore_4 .............. Passed 0.02 sec Start 111: test_squareplanar_4 96/224 Test #107: test_spectrophore_5 .............. Passed 0.02 sec 97/224 Test #109: test_squareplanar_2 .............. Passed 0.01 sec Start 112: test_squareplanar_5 Start 113: test_stereo_1 98/224 Test #102: test_smiles_3 .................... Passed 0.04 sec 99/224 Test #110: test_squareplanar_3 .............. Passed 0.01 sec 100/224 Test #111: test_squareplanar_4 .............. Passed 0.01 sec Start 114: test_stereo_2 Start 115: test_stereo_3 Start 116: test_stereo_4 101/224 Test #112: test_squareplanar_5 .............. Passed 0.01 sec 102/224 Test #113: test_stereo_1 .................... Passed 0.01 sec Start 117: test_stereo_5 Start 118: test_stereo_6 103/224 Test #97: test_shuffle_3 ................... Passed 0.07 sec 104/224 Test #114: test_stereo_2 .................... Passed 0.01 sec 105/224 Test #115: test_stereo_3 .................... Passed 0.01 sec 106/224 Test #116: test_stereo_4 .................... Passed 0.01 sec Start 119: test_stereoperception_1 Start 120: test_stereoperception_2 Start 121: test_stereoperception_3 Start 122: test_stereoperception_4 107/224 Test #117: test_stereo_5 .................... Passed 0.01 sec Start 123: test_tautomer_1 108/224 Test #99: test_shuffle_5 ................... Passed 0.08 sec Start 124: test_tautomer_2 109/224 Test #119: test_stereoperception_1 .......... Passed 0.03 sec Start 125: test_tautomer_3 110/224 Test #122: test_stereoperception_4 .......... Passed 0.03 sec Start 126: test_tautomer_4 111/224 Test #120: test_stereoperception_2 .......... Passed 0.04 sec 112/224 Test #121: test_stereoperception_3 .......... Passed 0.04 sec Start 127: test_tautomer_5 Start 128: test_tautomer_6 113/224 Test #123: test_tautomer_1 .................. Passed 0.04 sec Start 129: test_tautomer_7 114/224 Test #124: test_tautomer_2 .................. Passed 0.04 sec Start 130: test_tautomer_8 115/224 Test #126: test_tautomer_4 .................. Passed 0.03 sec Start 131: test_tautomer_9 116/224 Test #95: test_shuffle_1 ................... Passed 0.15 sec Start 132: test_tautomer_10 117/224 Test #127: test_tautomer_5 .................. Passed 0.03 sec Start 133: test_tautomer_11 118/224 Test #128: test_tautomer_6 .................. Passed 0.03 sec Start 134: test_tautomer_12 119/224 Test #129: test_tautomer_7 .................. Passed 0.03 sec Start 135: test_tautomer_13 120/224 Test #130: test_tautomer_8 .................. Passed 0.04 sec Start 136: test_tautomer_14 121/224 Test #118: test_stereo_6 .................... Passed 0.10 sec 122/224 Test #125: test_tautomer_3 .................. Passed 0.06 sec Start 137: test_tautomer_15 Start 138: test_tautomer_16 123/224 Test #96: test_shuffle_2 ................... Passed 0.18 sec Start 139: test_tautomer_17 124/224 Test #131: test_tautomer_9 .................. Passed 0.04 sec Start 140: test_tautomer_18 125/224 Test #132: test_tautomer_10 ................. Passed 0.04 sec 126/224 Test #133: test_tautomer_11 ................. Passed 0.03 sec 127/224 Test #134: test_tautomer_12 ................. Passed 0.03 sec Start 141: test_tautomer_19 Start 142: test_tautomer_20 Start 143: test_tautomer_21 128/224 Test #60: test_lssr_3 ...................... Passed 0.32 sec 129/224 Test #135: test_tautomer_13 ................. Passed 0.04 sec Start 144: test_tautomer_22 Start 145: test_tautomer_23 130/224 Test #136: test_tautomer_14 ................. Passed 0.03 sec Start 146: test_tautomer_24 131/224 Test #137: test_tautomer_15 ................. Passed 0.04 sec Start 147: test_tautomer_25 132/224 Test #138: test_tautomer_16 ................. Passed 0.04 sec 133/224 Test #139: test_tautomer_17 ................. Passed 0.03 sec Start 148: test_tautomer_26 Start 149: test_tautomer_27 134/224 Test #140: test_tautomer_18 ................. Passed 0.03 sec Start 150: test_tautomer_28 135/224 Test #141: test_tautomer_19 ................. Passed 0.03 sec Start 151: test_tetrahedral_1 136/224 Test #142: test_tautomer_20 ................. Passed 0.03 sec Start 152: test_tetrahedral_2 137/224 Test #151: test_tetrahedral_1 ............... Passed 0.00 sec Start 153: test_tetrahedral_3 138/224 Test #103: test_spectrophore_1 .............. Passed 0.20 sec 139/224 Test #152: test_tetrahedral_2 ............... Passed 0.00 sec Start 154: test_tetrahedral_4 Start 155: test_tetrahedral_5 140/224 Test #143: test_tautomer_21 ................. Passed 0.04 sec 141/224 Test #144: test_tautomer_22 ................. Passed 0.04 sec 142/224 Test #153: test_tetrahedral_3 ............... Passed 0.01 sec Start 156: test_tetranonplanar_1 Start 157: test_tetraplanar_1 Start 158: test_uniqueid_1 143/224 Test #145: test_tautomer_23 ................. Passed 0.04 sec 144/224 Test #146: test_tautomer_24 ................. Passed 0.03 sec 145/224 Test #154: test_tetrahedral_4 ............... Passed 0.01 sec 146/224 Test #155: test_tetrahedral_5 ............... Passed 0.01 sec 147/224 Test #156: test_tetranonplanar_1 ............ Passed 0.01 sec Start 159: test_uniqueid_2 Start 160: test_maereader_1 Start 161: test_maereader_2 Start 162: test_aromatest_1 Start 163: test_atom_1 148/224 Test #157: test_tetraplanar_1 ............... Passed 0.01 sec 149/224 Test #158: test_uniqueid_1 .................. Passed 0.01 sec 150/224 Test #159: test_uniqueid_2 .................. Passed 0.01 sec Start 164: test_atom_2 Start 165: test_atom_3 Start 166: test_atom_4 151/224 Test #147: test_tautomer_25 ................. Passed 0.04 sec 152/224 Test #148: test_tautomer_26 ................. Passed 0.04 sec 153/224 Test #163: test_atom_1 ...................... Passed 0.01 sec 154/224 Test #164: test_atom_2 ...................... Passed 0.01 sec Start 167: test_bond_1 Start 168: test_cansmi_1 Start 169: test_charge_mmff94_1 Start 170: test_charge_gasteiger_1 155/224 Test #149: test_tautomer_27 ................. Passed 0.04 sec 156/224 Test #150: test_tautomer_28 ................. Passed 0.04 sec 157/224 Test #165: test_atom_3 ...................... Passed 0.01 sec 158/224 Test #166: test_atom_4 ...................... Passed 0.01 sec 159/224 Test #167: test_bond_1 ...................... Passed 0.01 sec Start 171: test_datatest_1 Start 172: test_ffgaff_1 Start 173: test_ffghemical_1 Start 174: test_ffmmff94_1 Start 175: test_ffmmff94_2 160/224 Test #171: test_datatest_1 .................. Passed 0.01 sec Start 176: test_ffmmff94_3 161/224 Test #160: test_maereader_1 ................. Passed 0.04 sec Start 177: test_ffmmff94_4 162/224 Test #161: test_maereader_2 ................. Passed 0.04 sec Start 178: test_ffmmff94_5 163/224 Test #162: test_aromatest_1 ................. Passed 0.04 sec Start 179: test_ffmmff94_6 164/224 Test #61: test_lssr_4 ...................... Passed 0.41 sec 165/224 Test #179: test_ffmmff94_6 .................. Passed 0.01 sec Start 180: test_ffuff_1 Start 181: test_formalcharge_1 166/224 Test #170: test_charge_gasteiger_1 .......... Passed 0.06 sec Start 182: test_format_1 167/224 Test #181: test_formalcharge_1 .............. Passed 0.04 sec Start 183: test_formula_1 168/224 Test #175: test_ffmmff94_2 .................. Passed 0.08 sec 169/224 Test #182: test_format_1 .................... Passed 0.04 sec Start 184: test_internalcoord_1 Start 185: test_invalidsmarts_1 170/224 Test #169: test_charge_mmff94_1 ............. Passed 0.10 sec Start 186: test_invalidsmiles_1 171/224 Test #184: test_internalcoord_1 ............. Passed 0.01 sec Start 187: test_iterators_1 172/224 Test #177: test_ffmmff94_4 .................. Passed 0.08 sec 173/224 Test #185: test_invalidsmarts_1 ............. Passed 0.01 sec Start 188: test_logp_psa_1 Start 189: test_math_1 174/224 Test #186: test_invalidsmiles_1 ............. Passed 0.01 sec Start 190: test_math_2 175/224 Test #189: test_math_1 ...................... Passed 0.02 sec Start 191: test_math_3 176/224 Test #183: test_formula_1 ................... Passed 0.05 sec 177/224 Test #190: test_math_2 ...................... Passed 0.02 sec Start 192: test_math_4 Start 193: test_mol_1 178/224 Test #191: test_math_3 ...................... Passed 0.01 sec Start 194: test_pdbreadfile_1 179/224 Test #188: test_logp_psa_1 .................. Passed 0.04 sec 180/224 Test #192: test_math_4 ...................... Passed 0.01 sec Start 195: test_pdbreadfile_2 Start 196: test_pdbreadfile_3 181/224 Test #187: test_iterators_1 ................. Passed 0.04 sec Start 197: test_pdbreadfile_4 182/224 Test #193: test_mol_1 ....................... Passed 0.04 sec Start 198: test_phmodel_1 183/224 Test #194: test_pdbreadfile_1 ............... Passed 0.04 sec Start 199: test_residue_1 184/224 Test #195: test_pdbreadfile_2 ............... Passed 0.04 sec 185/224 Test #197: test_pdbreadfile_4 ............... Passed 0.03 sec Start 200: test_ringtest_1 Start 201: test_smartstest_1 186/224 Test #196: test_pdbreadfile_3 ............... Passed 0.04 sec Start 202: test_smartsparse_1 187/224 Test #202: test_smartsparse_1 ............... Passed 0.01 sec Start 203: test_smilesmatch_1 188/224 Test #168: test_cansmi_1 .................... Passed 0.19 sec Start 204: test_unitcell_1 189/224 Test #204: test_unitcell_1 .................. Passed 0.01 sec Start 205: test_cmlreadfile_1 190/224 Test #198: test_phmodel_1 ................... Passed 0.04 sec 191/224 Test #199: test_residue_1 ................... Passed 0.04 sec Start 206: inchiSamples.sdf_Test Start 207: inchiSamplesTechMan.sdf_Test 192/224 Test #200: test_ringtest_1 .................. Passed 0.05 sec Start 208: inchiSteffen_PubChem.smi_Test 193/224 Test #201: test_smartstest_1 ................ Passed 0.07 sec Start 209: pytest_babel 194/224 Test #205: test_cmlreadfile_1 ............... Passed 0.06 sec Start 210: pytest_sym 195/224 Test #208: inchiSteffen_PubChem.smi_Test .... Passed 0.05 sec Start 211: pytest_smartssym 196/224 Test #207: inchiSamplesTechMan.sdf_Test ..... Passed 0.06 sec Start 212: pytest_fastsearch 197/224 Test #206: inchiSamples.sdf_Test ............ Passed 0.10 sec Start 213: pytest_distgeom 198/224 Test #180: test_ffuff_1 ..................... Passed 0.35 sec Start 214: pytest_unique 199/224 Test #172: test_ffgaff_1 .................... Passed 0.40 sec Start 215: pytest_kekule 200/224 Test #212: pytest_fastsearch ................ Passed 0.17 sec Start 216: pytest_pdbformat 201/224 Test #174: test_ffmmff94_1 .................. Passed 0.43 sec Start 217: pytest_RInChI 202/224 Test #176: test_ffmmff94_3 .................. Passed 0.43 sec Start 218: pybindtest_bindings 203/224 Test #178: test_ffmmff94_5 .................. Passed 0.43 sec Start 219: pybindtest__pybel 204/224 Test #203: test_smilesmatch_1 ............... Passed 0.27 sec Start 220: pybindtest_example 205/224 Test #173: test_ffghemical_1 ................ Passed 0.49 sec Start 221: pybindtest_obconv_writers 206/224 Test #216: pytest_pdbformat ................. Passed 0.10 sec Start 222: pybindtest_cdjsonformat 207/224 Test #220: pybindtest_example ............... Passed 0.17 sec Start 223: pybindtest_pcjsonformat 208/224 Test #59: test_lssr_2 ...................... Passed 1.01 sec Start 224: pybindtest_roundtrip 209/224 Test #222: pybindtest_cdjsonformat .......... Passed 0.13 sec 210/224 Test #223: pybindtest_pcjsonformat .......... Passed 0.14 sec 211/224 Test #214: pytest_unique .................... Passed 0.47 sec 212/224 Test #219: pybindtest__pybel ................ Passed 0.40 sec 213/224 Test #218: pybindtest_bindings .............. Passed 0.59 sec 214/224 Test #215: pytest_kekule .................... Passed 0.80 sec 215/224 Test #12: test_builder_1 ................... Passed 2.19 sec 216/224 Test #211: pytest_smartssym ................. Passed 1.44 sec 217/224 Test #217: pytest_RInChI .................... Passed 1.49 sec 218/224 Test #221: pybindtest_obconv_writers ........ Passed 1.47 sec 219/224 Test #213: pytest_distgeom .................. Passed 1.99 sec 220/224 Test #22: test_canonstable_1 ............... Passed 3.42 sec 221/224 Test #209: pytest_babel ..................... Passed 3.62 sec 222/224 Test #210: pytest_sym ....................... Passed 5.05 sec 223/224 Test #56: test_addh_1 ...................... Passed 6.28 sec 224/224 Test #224: pybindtest_roundtrip ............. Passed 84.27 sec 100% tests passed, 0 tests failed out of 224 Total Test time (real) = 85.58 sec + cd .. + RPM_EC=0 ++ jobs -p + exit 0 Processing files: openbabel-3.1.1-24.mga10.x86_64 Executing(%doc): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.2MmNuG + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + cd openbabel-3.1.1 + DOCDIR=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/AUTHORS /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/COPYING /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/README.md /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/THANKS /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/FAQ.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/OBTwoMigration.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/OpenBabelGUI.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/api-footer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/api-header.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obabel.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obchiral.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obconformer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obenergy.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obfit.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgen.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgrep.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgui.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obminimize.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obprobe.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obprop.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obrotamer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obrotate.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obspectrophore.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.inc /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.mol2 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.png /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.pov /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/README.dioxin.pov /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/README.povray /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + RPM_EC=0 ++ jobs -p + exit 0 Provides: application() application(openbabelgui.desktop) openbabel = 3.1.1-24.mga10 openbabel(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcairo.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libinchi.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmaeparser.so.1()(64bit) libopenbabel.so.7()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libwx_baseu-3.2.so.0()(64bit) libwx_baseu-3.2.so.0(WXU_3.2)(64bit) libwx_gtk3u_core-3.2.so.0()(64bit) libwx_gtk3u_core-3.2.so.0(WXU_3.2)(64bit) libxml2.so.16()(64bit) libz.so.1()(64bit) Processing files: lib64openbabel7-3.1.1-24.mga10.x86_64 Executing(%license): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.I4yBxY + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + cd openbabel-3.1.1 + LICENSEDIR=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/licenses/lib64openbabel7 + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/licenses/lib64openbabel7 + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/COPYING /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/licenses/lib64openbabel7 + RPM_EC=0 ++ jobs -p + exit 0 Provides: lib64openbabel7 = 3.1.1-24.mga10 lib64openbabel7(x86-64) = 3.1.1-24.mga10 libopenbabel.so.7()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.7)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libz.so.1()(64bit) Processing files: lib64openbabel-devel-3.1.1-24.mga10.x86_64 Provides: cmake(OpenBabel3) = 3.1.0 cmake(openbabel3) = 3.1.0 devel(libopenbabel(64bit)) lib64openbabel-devel = 3.1.1-24.mga10 lib64openbabel-devel(x86-64) = 3.1.1-24.mga10 openbabel-devel = 3.1.1-24.mga10 pkgconfig(openbabel-3) = 3.1.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: devel(libgcc_s(64bit)) devel(libm(64bit)) devel(libstdc++(64bit)) devel(libz(64bit)) pkgconfig Processing files: perl-openbabel-3.1.1-24.mga10.x86_64 Provides: perl(Chemistry::OpenBabel) perl(Chemistry::OpenBabel::AliasData) perl(Chemistry::OpenBabel::CharPtrLess) perl(Chemistry::OpenBabel::LineSearchType) perl(Chemistry::OpenBabel::OBAngle) perl(Chemistry::OpenBabel::OBAngleData) perl(Chemistry::OpenBabel::OBAtom) perl(Chemistry::OpenBabel::OBAtomAtomIter) perl(Chemistry::OpenBabel::OBAtomBondIter) perl(Chemistry::OpenBabel::OBAtomHOF) perl(Chemistry::OpenBabel::OBAtomicHeatOfFormationTable) perl(Chemistry::OpenBabel::OBBase) perl(Chemistry::OpenBabel::OBBitVec) perl(Chemistry::OpenBabel::OBBond) perl(Chemistry::OpenBabel::OBBuilder) perl(Chemistry::OpenBabel::OBCommentData) perl(Chemistry::OpenBabel::OBConformerData) perl(Chemistry::OpenBabel::OBConversion) perl(Chemistry::OpenBabel::OBDOSData) perl(Chemistry::OpenBabel::OBDescriptor) perl(Chemistry::OpenBabel::OBElectronicTransitionData) perl(Chemistry::OpenBabel::OBError) perl(Chemistry::OpenBabel::OBExternalBond) perl(Chemistry::OpenBabel::OBExternalBondData) perl(Chemistry::OpenBabel::OBFFCalculation2) perl(Chemistry::OpenBabel::OBFFCalculation3) perl(Chemistry::OpenBabel::OBFFCalculation4) perl(Chemistry::OpenBabel::OBFFConstraint) perl(Chemistry::OpenBabel::OBFFConstraints) perl(Chemistry::OpenBabel::OBFFParameter) perl(Chemistry::OpenBabel::OBFingerprintIter) perl(Chemistry::OpenBabel::OBForceField) perl(Chemistry::OpenBabel::OBFormat) perl(Chemistry::OpenBabel::OBFreeGrid) perl(Chemistry::OpenBabel::OBFreeGridPoint) perl(Chemistry::OpenBabel::OBGenericData) perl(Chemistry::OpenBabel::OBGlobalDataBase) perl(Chemistry::OpenBabel::OBGridData) perl(Chemistry::OpenBabel::OBInternalCoord) perl(Chemistry::OpenBabel::OBMatrixData) perl(Chemistry::OpenBabel::OBMessageHandler) perl(Chemistry::OpenBabel::OBMol) perl(Chemistry::OpenBabel::OBMolAngleIter) perl(Chemistry::OpenBabel::OBMolAtomBFSIter) perl(Chemistry::OpenBabel::OBMolAtomDFSIter) perl(Chemistry::OpenBabel::OBMolAtomIter) perl(Chemistry::OpenBabel::OBMolBondBFSIter) perl(Chemistry::OpenBabel::OBMolBondIter) perl(Chemistry::OpenBabel::OBMolPairIter) perl(Chemistry::OpenBabel::OBMolRingIter) perl(Chemistry::OpenBabel::OBMolTorsionIter) perl(Chemistry::OpenBabel::OBOp) perl(Chemistry::OpenBabel::OBOrbital) perl(Chemistry::OpenBabel::OBOrbitalData) perl(Chemistry::OpenBabel::OBPairData) perl(Chemistry::OpenBabel::OBPcharge) perl(Chemistry::OpenBabel::OBPlugin) perl(Chemistry::OpenBabel::OBRTree) perl(Chemistry::OpenBabel::OBResidue) perl(Chemistry::OpenBabel::OBResidueAtomIter) perl(Chemistry::OpenBabel::OBResidueData) perl(Chemistry::OpenBabel::OBResidueIter) perl(Chemistry::OpenBabel::OBRing) perl(Chemistry::OpenBabel::OBRingData) perl(Chemistry::OpenBabel::OBRingSearch) perl(Chemistry::OpenBabel::OBRotamerList) perl(Chemistry::OpenBabel::OBRotationData) perl(Chemistry::OpenBabel::OBRotor) perl(Chemistry::OpenBabel::OBRotorKeys) perl(Chemistry::OpenBabel::OBRotorList) perl(Chemistry::OpenBabel::OBRotorRule) perl(Chemistry::OpenBabel::OBRotorRules) perl(Chemistry::OpenBabel::OBSSMatch) perl(Chemistry::OpenBabel::OBSerialNums) perl(Chemistry::OpenBabel::OBSetData) perl(Chemistry::OpenBabel::OBSmartsMatcher) perl(Chemistry::OpenBabel::OBSmartsPattern) perl(Chemistry::OpenBabel::OBSqrtTbl) perl(Chemistry::OpenBabel::OBStopwatch) perl(Chemistry::OpenBabel::OBSymmetryData) perl(Chemistry::OpenBabel::OBTorsion) perl(Chemistry::OpenBabel::OBTorsionData) perl(Chemistry::OpenBabel::OBTypeTable) perl(Chemistry::OpenBabel::OBUnitCell) perl(Chemistry::OpenBabel::OBVectorData) perl(Chemistry::OpenBabel::OBVibrationData) perl(Chemistry::OpenBabel::OBVirtualBond) perl(Chemistry::OpenBabel::VectorDouble) perl(Chemistry::OpenBabel::VectorInt) perl(Chemistry::OpenBabel::VectorOBBond) perl(Chemistry::OpenBabel::VectorOBMol) perl(Chemistry::OpenBabel::VectorOBResidue) perl(Chemistry::OpenBabel::VectorOBRing) perl(Chemistry::OpenBabel::VectorString) perl(Chemistry::OpenBabel::VectorUnsignedInt) perl(Chemistry::OpenBabel::VectorVInt) perl(Chemistry::OpenBabel::VectorVector3) perl(Chemistry::OpenBabel::VectorpOBGenericData) perl(Chemistry::OpenBabel::VectorpOBRing) perl(Chemistry::OpenBabel::_OBAtomAtomIter) perl(Chemistry::OpenBabel::_OBAtomBondIter) perl(Chemistry::OpenBabel::_OBMolAngleIter) perl(Chemistry::OpenBabel::_OBMolAtomBFSIter) perl(Chemistry::OpenBabel::_OBMolAtomDFSIter) perl(Chemistry::OpenBabel::_OBMolAtomIter) perl(Chemistry::OpenBabel::_OBMolBondIter) perl(Chemistry::OpenBabel::_OBMolPairIter) perl(Chemistry::OpenBabel::_OBMolRingIter) perl(Chemistry::OpenBabel::_OBMolTorsionIter) perl(Chemistry::OpenBabel::_OBResidueAtomIter) perl(Chemistry::OpenBabel::matrix3x3) perl(Chemistry::OpenBabel::obLogBuf) perl(Chemistry::OpenBabel::rotor_digit) perl(Chemistry::OpenBabel::stringbuf) perl(Chemistry::OpenBabel::vector3) perl(Chemistry::OpenBabelc) perl-openbabel = 3.1.1-24.mga10 perl-openbabel(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libperl.so.5.42()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(vars) perl-base >= 2:5.42.0 Processing files: python3-openbabel-3.1.1-24.mga10.x86_64 Provides: python-openbabel = 3.1.1-24.mga10 python3-openbabel = 3.1.1-24.mga10 python3-openbabel(x86-64) = 3.1.1-24.mga10 python3.13-openbabel = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libpython3.13.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 Obsoletes: python-openbabel < 3.1.1-24.mga10 Processing files: ruby-openbabel-3.1.1-24.mga10.x86_64 Provides: ruby-openbabel = 3.1.1-24.mga10 ruby-openbabel(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libruby.so.3.4()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: openbabel-debugsource-3.1.1-24.mga10.x86_64 Provides: openbabel-debugsource = 3.1.1-24.mga10 openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openbabel-debuginfo-3.1.1-24.mga10.x86_64 Provides: debuginfo(build-id) = 02e08bb059f78bba92fa64a03dcd53c875104b34 debuginfo(build-id) = 0418429d5e16d43c13551e769973fca6636222d7 debuginfo(build-id) = 0460a2269f72442be043e885b32f36bd62cb6963 debuginfo(build-id) = 0bd93efd53fc06d767c1e2571d837491f043a10d debuginfo(build-id) = 0e022d4acd4ec2e11005d8f57bc2f72a280b0f51 debuginfo(build-id) = 0eeb8c49d72bc1c169dc64d35b7f18346061506c debuginfo(build-id) = 11ce34c6a93c68cbe0c37d9561b8f98b2d01d6f7 debuginfo(build-id) = 12ddf34e5dc7845dd49e088349c7bc75f881b784 debuginfo(build-id) = 14e64acf687750630809565c4d6ebc17207534eb debuginfo(build-id) = 16d6ca8f933dd8015063a3a302db62afd8ccc34a debuginfo(build-id) = 178ca696408f5f0923b247a619a29690bd8a9f94 debuginfo(build-id) = 17c57fe5609d8e81f6430d718fa8d33bbe93bb6f debuginfo(build-id) = 191b3d8ba2f1a04fe5e2c586a3cf8719ffad2dad debuginfo(build-id) = 1b77b85fd0b23025d2efe04024865a5a6f6b5bf5 debuginfo(build-id) = 1bd91a2c24b531bc4120b921f69cd5b88f70bb5a debuginfo(build-id) = 1d3eef9b8524a8ee919a8b6f7f66c96f9ef5b3eb debuginfo(build-id) = 1d75ed049e4df2f8c5be6d691bd94e23b3e0213d debuginfo(build-id) = 1dffcd971550d8098aa3d1dd85583bbfe9c5f59d debuginfo(build-id) = 217786ecebd7fe55fd5e019b0cd2ad11b5898131 debuginfo(build-id) = 220011188756cf08e1ad7e1490b3977201f4b913 debuginfo(build-id) = 2522e15385c05575e27bbc65cdf4b7a4fba0705b debuginfo(build-id) = 297a7c012aa4573ea903dcd0da5dcbf8793bf0e5 debuginfo(build-id) = 2a5f746ab5d21f1eaaf45796d94f7733b96b53c2 debuginfo(build-id) = 2ca604a64adf29e4971eee4d311e16ea481e044c debuginfo(build-id) = 2ec51517f5b9681c40801c206b3dbc45eea4daa5 debuginfo(build-id) = 319f0813b7557873a882784e7a95d8649e4dc9c6 debuginfo(build-id) = 327eda67b371d087fdd4fcd4096029624ed37490 debuginfo(build-id) = 34cc3fd1cbb381773b3b5cbb94d339cc2695cad3 debuginfo(build-id) = 37e4fd8a76d9e4aea37120e9093d05a06038ece8 debuginfo(build-id) = 3832503301fee4cd585b6258ea6604c972060daa debuginfo(build-id) = 389b3597a51d1c962a2d65d589c63fb5b1acba8f debuginfo(build-id) = 390330fe7235642d4ceb19804d114626129401f9 debuginfo(build-id) = 3abe4d557787c66483da2329c9e89951bf53550b debuginfo(build-id) = 3ce7e4725497b392cc2b949e9df17addc0cc7dbc debuginfo(build-id) = 3e4a7b245ec367422e648c4cbba84a8926f08cb6 debuginfo(build-id) = 4212588ee1fd498482873056c7ea7900f4fe9594 debuginfo(build-id) = 42643abbb54939a459ee7db48e9632baf73589a2 debuginfo(build-id) = 4772988858be6d730341bfc5ea3ffe0d19ba2e67 debuginfo(build-id) = 48c840c45cd14edfc401376d1278201f2e43a853 debuginfo(build-id) = 4abafeb76634deb659640567db3c0827b83541bc debuginfo(build-id) = 4ac18fe91faa12bf8eaa6fbefdd7e9de9b61fd0b debuginfo(build-id) = 4bf1fda5c4e9f651642d24359e2cfc58f4a49875 debuginfo(build-id) = 518aafcff1d85d271a9b879dbf9b64eca147b268 debuginfo(build-id) = 57a38aeda21de50a4b5d365aa1c1f536f76d5150 debuginfo(build-id) = 57ce4b7ca12771ed3e312264fd8dcc367b5bdade debuginfo(build-id) = 57e3b944dfee8eb5ef66ce2d0646c5a3b2f2b531 debuginfo(build-id) = 5a0c4104cc731a68fff58ff7a92888b0a77b8b07 debuginfo(build-id) = 5a8722ad0b1e1f2d1d2f1f8b82767ad43f85a2c3 debuginfo(build-id) = 5c322ce41f2f754ca68caadc88caf6c7bb2b942f debuginfo(build-id) = 5e93bf015993c0d89490b5f41b2ddcc375f0dfc3 debuginfo(build-id) = 603f34ff39ec6468eaa7cc8f79711dfdd6665666 debuginfo(build-id) = 61d02b36099db15bd3d1f97091244c75306ebc61 debuginfo(build-id) = 677a9c79793c4d0d836a838f9deb30834943ef93 debuginfo(build-id) = 696b703d944ef33d64886e01158ba3c18d2ad9d8 debuginfo(build-id) = 698e639691ba84ea7e1bac49fc1d9c6bed929d07 debuginfo(build-id) = 711f2cf7cd7f3952d10d2aac77e6c2daa5681d2b debuginfo(build-id) = 712186cb60888fca3a3a4979706477bc57f6fb0b debuginfo(build-id) = 7127565a1717d78160757f96498e828d05aa3a5d debuginfo(build-id) = 71b445faec1a4cba9be8e7623e4bb9c16980d7b9 debuginfo(build-id) = 72c351ba1ee47f990414150f12e71aac6b5c0db9 debuginfo(build-id) = 7486eb30d316e5c99e31a31a4d40b16988f5ef55 debuginfo(build-id) = 759303b083bbc8bc9d8eec6ce79bf23854244a41 debuginfo(build-id) = 76d0ffd4c6d50738238193cf9b3dfcb2032181d2 debuginfo(build-id) = 7803cbd1d76edad930a6c03ba6a143ef0f8b8c57 debuginfo(build-id) = 7845925447fbb3c29b3d854772ae8bebffa20bf5 debuginfo(build-id) = 78ccbf1ccec0e0f01cbd0da132d8da9f76f773e0 debuginfo(build-id) = 7932c8f45ec4a04ce970b54981cc9d4e79c9ca4e debuginfo(build-id) = 7a9bbcb543dded79031ac3e014ba3c41dfdea5e2 debuginfo(build-id) = 7ae711add26ebc488bdd90c07705a789a4123c9f debuginfo(build-id) = 7b4d50b82046d26efd362293d210411b455bbc81 debuginfo(build-id) = 7b58655755dfde269437bbfb36393a6b51c57262 debuginfo(build-id) = 7bb624913a587a7ea255f35102615a4130eb1063 debuginfo(build-id) = 7c385ad140d44ae471a7ac3b1ddefae702b6c176 debuginfo(build-id) = 7fbf15e85567ce27385e7eff7256f7963c642979 debuginfo(build-id) = 7ff202d1ea3308a40a58317799dd9b9c61172a94 debuginfo(build-id) = 83c682b5c3c9e15581dc912e9f0c93d96d570fae debuginfo(build-id) = 85a084094a2ad866676ad33b163e457850af11bd debuginfo(build-id) = 85d46d3a020c92e07f590b81e7356a81ada0a0c6 debuginfo(build-id) = 8af610a4490d21133052fc02b2a9f39b347f225d debuginfo(build-id) = 8b43047326fe357a21e3f4fc6178d9bdaaa39e00 debuginfo(build-id) = 8cacef9b0a89fd81434d8574a4719565d421835d debuginfo(build-id) = 8cc46a492272f117ba5689278f4444a3effdd61a debuginfo(build-id) = 8ddd4f2a5e167b6e02e5ad0b349b51fdbe85862f debuginfo(build-id) = 8fdbe3156f61a03af6122a1f62543b58ec4f9918 debuginfo(build-id) = 9359336d6f8e78da5070a7acd1be3028e5b61301 debuginfo(build-id) = 96d4e32bd1536c2fe6693414d4f87089c7e155e6 debuginfo(build-id) = 990438fa4c33fea327ebe8b8c99c22857180afc7 debuginfo(build-id) = 9938e51b8cf0557f22e6f4ff8520aaa257a4d2e8 debuginfo(build-id) = 99c056e00bdfb9a56decf4c3fb1ff2580d935691 debuginfo(build-id) = 9f488b532a1f9b1c77fc76daebd0788018e9db5c debuginfo(build-id) = a12b21e03fd470eef57811da07ddc5c31e03210d debuginfo(build-id) = a12c23512df2c59f93be4f09b5a0e426f59a8ed3 debuginfo(build-id) = a274dbaf127572063e9ceea69b73f626a397f6ae debuginfo(build-id) = a4d7f0fc74c578c0fbf09ed0cb762e5c2548ff55 debuginfo(build-id) = a6ef34a96120722c77fbae7b6af4997485a4ee2d debuginfo(build-id) = a73b7a619a6f9f117967e9348e29d1e4ec8ec0da debuginfo(build-id) = a790f3635542445628e98812b778152811d4eb1b debuginfo(build-id) = aa0f1e0369fc9e0ae062e33b742f7ac7c2c7a276 debuginfo(build-id) = abfee627be27ba6fcf8a66dd5f591165a7eb5786 debuginfo(build-id) = ae280dfc56f33fb5fe20507c4e5cb44175e876c7 debuginfo(build-id) = ae5567f8269e49d914fab358d95e46a5c11bca1b debuginfo(build-id) = ae8c115eba842c4e3b939ae949548e63f09d3843 debuginfo(build-id) = aead479e2c5a14509d781d28ec1d3cadfbb7be12 debuginfo(build-id) = aed356d125d4bf268eff477090236563d671d9a8 debuginfo(build-id) = b175587719e3d77399923325308f08413fc3adcd debuginfo(build-id) = b1bf7fa2461425e84c4b0b397851685b564445ba debuginfo(build-id) = b2dddac411d8e74aff86ae1da39b4a2e0cc14c3a debuginfo(build-id) = b63e2383a772b5c1b9daa9ac4db9bba7625911f0 debuginfo(build-id) = b92a051313a9571ab4c956f58b939cc4d88d8bd1 debuginfo(build-id) = bcc8ad9e5fbce13fc71ea7004d73851c993ac093 debuginfo(build-id) = bdcd37d059be5f6f8630168cfcf08c342c69707e debuginfo(build-id) = c14ea945bca3081f6912f977fda27ee0be9f39b6 debuginfo(build-id) = c1dd7adddbd47a6e932b3a614258b3e8d5718c88 debuginfo(build-id) = c8ac2e9b2770c6e231ac09b4a1c2f0b91ba3b9ec debuginfo(build-id) = c926f273e105c4b7838666a721b4add2cfc0f475 debuginfo(build-id) = ca91aa5736437018c68be23122c2a139b3533968 debuginfo(build-id) = cc23d6b7af6de0ed5f9b5a92c878480ba76a37c2 debuginfo(build-id) = cf4fa8c29509edd872a730a67c25f4acb06da40e debuginfo(build-id) = d003594531d8a6e29d798654b2db1b63c3caa10a debuginfo(build-id) = d0ca878a676506abc46db6c6352ffcf456d05485 debuginfo(build-id) = da47800cfda139033323f70e5e958fcdc2894a6e debuginfo(build-id) = db0c71a587c0f51bd9eca7cee7ac8df463317e4f debuginfo(build-id) = de0ab7a790caa21f555c550a1c8db03ace8f22a8 debuginfo(build-id) = df943e1b47716b4c551034ce5632ec339870c103 debuginfo(build-id) = e0bb51b3f5eaec83febc762379d18f499e68205e debuginfo(build-id) = e22f2f56cc2c782cdc220174872699635a2d03d5 debuginfo(build-id) = e3197c6b7467960b807e655c10264bdc9193d7b4 debuginfo(build-id) = e44520982d0f12f4ee8f78674f337850608a4206 debuginfo(build-id) = e44af6e5a2d10c91c9424f72f891ffe400c707cb debuginfo(build-id) = e4f3a383e39ce348ed2a6458e7ef18987babafac debuginfo(build-id) = e55edac7c854b51acb74a3d8d13bdfaadcd5e07f debuginfo(build-id) = e94900ac24b4a436f020b7176f9fbc4e0783dc33 debuginfo(build-id) = eb9a49e531c114be81b46a28ce5b04cbe4dcd68d debuginfo(build-id) = ee97250496b966f741b3b7b837fb309df6417cc4 debuginfo(build-id) = eec52c7b99271c09b22a59cd157baed8b8d8e772 debuginfo(build-id) = ef78b49a156ec984a064d5efe74a3c92f1d08162 debuginfo(build-id) = f4d20baa724b56561761b7040902045b26a2e649 debuginfo(build-id) = f6cfdbf50b6fa2e7ed7acbf6d74a1390493dc7b7 debuginfo(build-id) = f78e4fa3d7943015a58596100dba64b8288f1aab debuginfo(build-id) = fac11a4dfe723f5e013dd675661ab241e2ff2794 debuginfo(build-id) = fad201a19401453f530268f38dcbcb2ebf5dc07c debuginfo(build-id) = fae695f47b6e263309c53c284f5b4da25b68ae14 debuginfo(build-id) = fb038423672c8e56ce44e1fc3f6e00c07da36043 debuginfo(build-id) = ff23318c6f8ab5fedabb9e7c20580d59861f6d29 debuginfo(build-id) = ffabdeb0404ca6a3006c21976cad200e88555b06 openbabel-debuginfo = 3.1.1-24.mga10 openbabel-debuginfo(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Processing files: lib64openbabel7-debuginfo-3.1.1-24.mga10.x86_64 Provides: debuginfo(build-id) = 890e6d02a10302686d9140c299bf9064ceacaf06 lib64openbabel7-debuginfo = 3.1.1-24.mga10 lib64openbabel7-debuginfo(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Processing files: perl-openbabel-debuginfo-3.1.1-24.mga10.x86_64 Provides: debuginfo(build-id) = ead479a0c184ea2e42a90176a9fa967c301906f6 perl-openbabel-debuginfo = 3.1.1-24.mga10 perl-openbabel-debuginfo(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Processing files: python3-openbabel-debuginfo-3.1.1-24.mga10.x86_64 Provides: debuginfo(build-id) = dbe68df71a7210fed19fb7ccfdcfb575c4235b05 python-openbabel-debuginfo = 3.1.1-24.mga10 python3-openbabel-debuginfo = 3.1.1-24.mga10 python3-openbabel-debuginfo(x86-64) = 3.1.1-24.mga10 python3.13-openbabel-debuginfo = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Processing files: ruby-openbabel-debuginfo-3.1.1-24.mga10.x86_64 Provides: debuginfo(build-id) = 57ca50b14bbad81bf4938a100e2a68ad461b043d ruby-openbabel-debuginfo = 3.1.1-24.mga10 ruby-openbabel-debuginfo(x86-64) = 3.1.1-24.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-24.mga10 Checking for unpackaged file(s): /usr/lib/rpm/check-files /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel-devel-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/ruby-openbabel-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel7-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/python3-openbabel-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/perl-openbabel-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/perl-openbabel-debuginfo-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/ruby-openbabel-debuginfo-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/python3-openbabel-debuginfo-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-debugsource-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel7-debuginfo-3.1.1-24.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-debuginfo-3.1.1-24.mga10.x86_64.rpm Executing(rmbuild): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.c1Lisv + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + test -d /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + rm -rf /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + RPM_EC=0 ++ jobs -p + exit 0 D: [iurt_root_command] Success!