D: [iurt_root_command] chroot Building target platforms: x86_64 Building for target x86_64 Installing /home/pterjan/rpmbuild/SRPMS/nco-5.3.6-3.mga10.src.rpm Executing(%mkbuilddir): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.98UVPg Executing(%prep): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.5PDrP4 + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + rm -rf nco-5.3.6 + /usr/lib/rpm/rpmuncompress -x /home/pterjan/rpmbuild/SOURCES/nco-5.3.6.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd nco-5.3.6 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/nco-install_C_headers.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.wBivUb + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.6 + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + export CPPFLAGS=-I/usr/include/udunits2 + CPPFLAGS=-I/usr/include/udunits2 + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + CONFIGURE_TOP=. + '[' 1 = 1 ']' ++ find . -name config.guess -o -name config.sub + for i in $(find ${CONFIGURE_TOP} -name config.guess -o -name config.sub) ++ basename ./autobld/config.guess + '[' -f /usr/lib/rpm/mageia/config.guess ']' ++ basename ./autobld/config.guess + cp -af /usr/lib/rpm/mageia/config.guess ./autobld/config.guess + for i in $(find ${CONFIGURE_TOP} -name config.guess -o -name config.sub) ++ basename ./autobld/config.sub + '[' -f /usr/lib/rpm/mageia/config.sub ']' ++ basename ./autobld/config.sub + cp -af /usr/lib/rpm/mageia/config.sub ./autobld/config.sub + /usr/lib/rpm/mageia/force-as-needed-for-shared-lib-in-libtool Forcing -Wl,--as-needed in configure/libtool to workaround libtool bug (cf http://lists.gnu.org/archive/html/libtool-patches/2004-06/msg00002.html) + /usr/lib/rpm/mageia/fix-libtool-ltmain-from-overlinking + /usr/lib/rpm/mageia/fix-libtool-from-moving-options-after-libs . Fixing libtool inside configure to pass -Wl,xxx options before libraries + /usr/lib/rpm/mageia/fix-dlsearch-path-in-libtool-for-multilib . lib64 Forcing run-time library search path definition in configure to prevent libtool from adding rpath for standard directories (configure was generated with libtool without support for autodetection) + ./configure --host=x86_64-mageia-linux-gnu --build=x86_64-mageia-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HOST=Mageia --enable-ncap2 --disable-static --disable-dependency-tracking --enable-nco_cplusplus --with-hdf5-plugin-path=/usr/lib64/hdf5/plugin --includedir=/usr/include/nco checking build system type... x86_64-mageia-linux-gnu checking host system type... x86_64-mageia-linux-gnu checking target system type... x86_64-mageia-linux-gnu ./configure: line 3579: git: command not found checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '500' is supported by ustar format... yes checking whether GID '1001' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-mageia-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking whether yytext is a pointer... yes checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-mageia-linux-gnu file names to x86_64-mageia-linux-gnu format... func_convert_file_noop checking how to convert x86_64-mageia-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-mageia-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-mageia-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-mageia-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-mageia-linux-gnu-strip... no checking for strip... strip checking for x86_64-mageia-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-mageia-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for creat... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for getopt.h... yes checking for libintl.h... yes checking for limits.h... yes checking for locale.h... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t... yes checking for gid_t... yes checking for ptrdiff_t... yes checking size of int*... 8 checking for gcc option to enable large file support... none needed ################################# # Test for netCDF # ################################ checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking for gcc options needed to detect all undeclared functions... none needed checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for netcdf_mem.h... yes checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... no checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... no checking for acosf... no checking for asinf... no checking for atanf... no checking for atan2f... no checking for cosf... no checking for expf... no checking for fabsf... no checking for fmodf... no checking for log10f... no checking for logf... no checking for powf... no checking for sinf... no checking for sqrtf... no checking for tanf... no checking for erff... no checking for erfcf... no checking for gammaf... no checking for acoshf... no checking for asinhf... no checking for atanhf... no checking for coshf... no checking for sinhf... no checking for tanhf... no checking for ceilf... no checking for floorf... no checking for nearbyint... no checking for rint... no checking for round... no checking for trunc... no checking for nearbyintf... no checking for rintf... no checking for roundf... no checking for truncf... no checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOS build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... no checking for antlr... antlr configure: antlr library was found checking whether NCO C++ interface library libnco_c++ should be built... yes ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled ######################################## # Testing for CCR support # ######################################## checking where to put HDF5 plugins... /usr/lib64/hdf5/plugin checking whether Community Codec Repository library should be used... no checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS2 support # ######################################## checking for udunits2.h... yes checking for library containing ut_parse... -ludunits2 configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=7.2 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco_c++/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: ANTLR_INC............ ANTLR_ROOT........... AR_FLAGS............. cru CC................... gcc CFLAGS............... -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/udunits2 -I/usr/include CXX.................. g++ CXXFLAGS............. -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ENABLE_CCR........... no ENABLE_DAP........... yes ENABLE_GSL........... yes ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS2...... yes GSL_INC.............. /usr/include GSL_ROOT............. /usr HAVE_ANTLR........... antlr HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... /usr/lib64/hdf5/plugin HOST................. Mageia HOSTNAME............. LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm NETCDF_INC........... NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. x86_64-mageia-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* + /usr/bin/make -O -j16 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in data make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[2]: /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco/ncks: No such file or directory make[2]: [Makefile:589: in_4c.nc] Error 127 (ignored) make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -o big.nc big.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o in_mlt_rec1.nc in_mlt_rec1.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o in_mlt_rec2.nc in_mlt_rec2.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' ln -s -f in_zarr4 h0001 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' ln -s -f in_zarr4 h0002 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' ln -s -f in_zarr4 h0003 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' Making all in src Making all in nco make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory 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make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst': nco_lst_utl.c:38:89: warning: unknown escape sequence: '\.' 38 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ | ^ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_md5.lo nco_md5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_flt.c -fPIC -DPIC -o .libs/nco_flt.o nco_flt.c: In function 'nco_flt_hdf5_prs': nco_flt.c:339:37: warning: '%s' directive argument is null [-Wformat-overflow=] 339 | (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_mta.lo nco_mta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o nco_fl_utl.c: In function 'nco_fl_nm_prs': nco_fl_utl.c:1754:45: warning: '%d' directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~ nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from nco_fl_utl.h:26, from nco_fl_utl.c:10: In function 'sprintf', inlined from 'nco_fl_nm_prs' at nco_fl_utl.c:1754:8: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 9 and 19 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_grp_trv.lo nco_grp_trv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g 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-DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_kd.lo nco_kd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_kd.c -fPIC -DPIC -o .libs/nco_kd.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_omp.lo nco_omp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory 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'/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_pck.lo nco_pck.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o nco_pck.c: In function 'nco_pck_map_get': nco_pck.c:160:88: warning: '%s' directive argument is null [-Wformat-overflow=] 160 | (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_scl_utl.lo nco_scl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe 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-I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_ply.c -fPIC -DPIC -o .libs/nco_ply.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_scm.lo nco_scm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rth_utl.lo nco_rth_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_ply_lst.c -fPIC -DPIC -o .libs/nco_ply_lst.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o nco_sng_utl.c: In function 'nm2sng_cdl': nco_sng_utl.c:270:41: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In file included from /usr/include/stdio.h:970, from nco_sng_utl.h:21, from nco_sng_utl.c:10: In function 'snprintf', inlined from 'nm2sng_cdl' at nco_sng_utl.c:270:2: /usr/include/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function 'nm2sng_fl': nco_sng_utl.c:466:41: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 466 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In function 'snprintf', inlined from 'nm2sng_fl' at nco_sng_utl.c:466:2: /usr/include/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c ncecat.c: In function 'main': ncecat.c:812:30: warning: '%02d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 812 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~ ncecat.c:812:29: note: directive argument in the range [0, 2147483646] 812 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~~~ In file included from /usr/include/stdio.h:970, from ncecat.c:46: In function 'sprintf', inlined from 'main' at ncecat.c:812:9: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncks.o ncks.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sph.c -fPIC -DPIC -o .libs/nco_sph.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c ncap_lex.l: In function 'nco_yylex': ncap_lex.l:611:34: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 611 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:970, from ncap_lex.c:277: In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:611:13: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:587:36: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 587 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:587:8: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:634:34: warning: '%s' directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] 634 | (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:634:13: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 66 or more bytes (assuming 321) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_s1d.c -fPIC -DPIC -o .libs/nco_s1d.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncra.o ncra.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o nco_prn.c: In function 'nco_prn_var_val_lmt': nco_prn.c:1651:53: warning: '%s' directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1651 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:970, from nco_prn.h:22, from nco_prn.c:10: In function 'sprintf', inlined from 'nco_prn_var_val_lmt' at nco_prn.c:1651:10: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 19 and 118 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o nco_grp_utl.c: In function 'nco_chk_xtn': nco_grp_utl.c:2927:134: warning: '%s' directive argument is null [-Wformat-overflow=] 2927 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of HDF-EOS5 standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_he5,att_xtn_val); | ^~ nco_grp_utl.c:2944:132: warning: '%s' directive argument is null [-Wformat-overflow=] 2944 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of netCDF standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_nc,att_xtn_val); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4352:113: warning: '%s' directive argument is null [-Wformat-overflow=] 4352 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -release 5.3.6 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnco.la -rpath /usr/lib64 nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_crt.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_flt.lo nco_grp_utl.lo nco_grp_trv.lo nco_kd.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ply.lo nco_ply_lst.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_s1d.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_sph.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crti.o /usr/lib/gcc/x86_64-mageia-linux/15/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_crt.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_flt.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_kd.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ply.o .libs/nco_ply_lst.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_s1d.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_sph.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -O2 -g -fstack-protector-strong -m64 -fopenmp -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -fopenmp -L/usr/lib64 -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/x86_64-mageia-linux/15 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../.. -L/lib -L/usr/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-mageia-linux/15/crtendS.o /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crtn.o -Wl,-soname -Wl,libnco-5.3.6.so -o .libs/libnco-5.3.6.so libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-5.3.6.so" "libnco.so") libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ncatted ncatted.o -L/usr/lib64 ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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'nco_hgh.cc' || echo './'`nco_hgh.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_hgh.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_hgh.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_dmn.lo `test -f 'nco_dmn.cc' || echo './'`nco_dmn.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_dmn.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_dmn.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_fl.lo `test -f 'nco_fl.cc' || echo './'`nco_fl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_fl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_fl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_utl.lo `test -f 'nco_utl.cc' || echo './'`nco_utl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_utl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_att.lo `test -f 'nco_att.cc' || echo './'`nco_att.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_att.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_att.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_var.lo `test -f 'nco_var.cc' || echo './'`nco_var.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_var.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_var.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -release 5.3.6 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnco_c++.la -rpath /usr/lib64 libnco_c___la-nco_att.lo libnco_c___la-nco_dmn.lo libnco_c___la-nco_fl.lo libnco_c___la-nco_hgh.lo libnco_c___la-nco_utl.lo libnco_c___la-nco_var.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crti.o /usr/lib/gcc/x86_64-mageia-linux/15/crtbeginS.o .libs/libnco_c___la-nco_att.o .libs/libnco_c___la-nco_dmn.o .libs/libnco_c___la-nco_fl.o .libs/libnco_c___la-nco_hgh.o .libs/libnco_c___la-nco_utl.o .libs/libnco_c___la-nco_var.o -O2 -g -fstack-protector-strong -m64 -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -L/usr/lib64 -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/x86_64-mageia-linux/15 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../.. -L/lib -L/usr/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-mageia-linux/15/crtendS.o /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crtn.o -Wl,-soname -Wl,libnco_c++-5.3.6.so -o .libs/libnco_c++-5.3.6.so libtool: link: (cd ".libs" && rm -f "libnco_c++.so" && ln -s "libnco_c++-5.3.6.so" "libnco_c++.so") libtool: link: ( cd ".libs" && rm -f "libnco_c++.la" && ln -s "../libnco_c++.la" "libnco_c++.la" ) make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' Making all in nco++ make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o nco_gsl.o nco_gsl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o sym_cls.o sym_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o sdo_utl.o sdo_utl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o NcapVar.o NcapVar.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_cls.o fmc_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o NcapVarVector.o NcapVarVector.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o prs_cls.o prs_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2_att.o ncap2_att.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o Invoke.o Invoke.cc In file included from libnco++.hh:26, from Invoke.cc:13: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from fmc_gsl_cls.hh:12: ../../config.h:446:9: note: this is the location of the previous definition 446 | #define NCO_GSL_VERSION 208 | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2.o ncap2.cc In file included from libnco++.hh:26, from ncap2.cc:80: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from fmc_gsl_cls.hh:12: ../../config.h:446:9: note: this is the location of the previous definition 446 | #define NCO_GSL_VERSION 208 | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoParser.o ncoParser.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoLexer.o ncoLexer.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_gsl_cls.o fmc_gsl_cls.cc In file included from fmc_gsl_cls.cc:10: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from ncap2_att.hh:5, from ncap2_utl.hh:60, from ncoGrammar.g:31, from fmc_gsl_cls.hh:43: ../../config.h:446:9: note: this is the location of the previous definition 446 | #define NCO_GSL_VERSION 208 | ^~~~~~~~~~~~~~~ In file included from nco_gsl.hh:31, from fmc_gsl_cls.cc:11: ../../config.h:446:9: warning: 'NCO_GSL_VERSION' redefined 446 | #define NCO_GSL_VERSION 208 | ^~~~~~~~~~~~~~~ fmc_gsl_cls.hh:49:11: note: this is the location of the previous definition 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2_utl.o ncap2_utl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_all_cls.o fmc_all_cls.cc fmc_all_cls.cc: In member function 'virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)': fmc_all_cls.cc:1965:60: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 1965 | snprintf(units_new_sng,NCO_MAX_LEN_DATE_SNG,"days since %d-01-01 00:00:00",lcl_tm_sct.year); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from fmc_all_cls.hh:14, from fmc_all_cls.cc:10: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)' at fmc_all_cls.cc:1965:24: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 28 and 38 bytes into a destination of size 27 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoTree.o ncoTree.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ../nco/libnco.la -lantlr -L/usr/lib64 -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Nothing to be done for 'all-am'. Making all in man make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' + make -C doc html pdf make: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' rm -rf nco.htp if /bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi nco.texi:392: warning: no htmlxref.cnf entry found for `dir' TEXINPUTS="../autobld:$TEXINPUTS" \ MAKEINFO='/bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/missing' makeinfo -I .' \ texi2dvi --pdf --batch -I . --build-dir=nco.t2p -o nco.pdf \ nco.texi This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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--cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [103] [104] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8659--8659 [][] [105] [106] [107] [108] [109] [110] 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[126] [127] [128] [129] [130] [131] Underfull \hbox (badness 10000) in paragraph at lines 10690--10697 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [132] [133] [134] [135] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11153--11153 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [136] [137] [138] [139] [140] [141] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11564--11564 [][] [142] [143] [144] [145] [146] [147] [148] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12280--12280 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12287--12287 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [150] [151] [152] [153] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12666--12666 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12667--12667 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12668--12668 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12669--12669 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12677--12677 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [154] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12719--12719 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [155] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12794--12794 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [156] [157] [158] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12982--12982 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [159] [160] [161] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [162] [163] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [164] [165] [166] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [167] [168] [169] [170] [171] [172] [173] [174] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [175] [176] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14550--14550 [][] [177] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14590--14590 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14607--14607 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [178] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14636--14636 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [179] [180] [181] [182] Overfull \hbox (106.92076pt too wide) in paragraph at lines 14907--14907 [][] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15012--15012 [][] [184] Overfull \hbox (14.94176pt too wide) in paragraph at lines 15031--15031 [][] [185] [186] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15202--15202 [][] [187] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [188] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [189] [190] [191] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [192] [193] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [194] [195] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [196] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [197] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [198] [199] [200] [201] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [203] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [205] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [206] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [207] [208] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [209] [210] [211] [212] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [213] [214] [215] [216] [217] [218] [219] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [220] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [221] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [222] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [223] [224] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [225] [226] [227] [228] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [229] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [230] [231] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [232] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [233] [234] [235] [236] [237] [238] [239] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [240] [241] [242] [243] [244] [245] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [246] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [247] [248] [249] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [250] [251] [252] [253] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [254] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [255] [256] [257] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [258] [259] [260] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [261] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [262] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [265] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [266] [267] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [268] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [269] [270] [271] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [272] [273] [274] [275] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [276] [277] [278] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [279] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [280] [281] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [282] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [283] [284] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [285] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [286] [287] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [288] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [289] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [290] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [291] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [292] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [293] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [295] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [296] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [297] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [298] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [299] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [300] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [301] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [302] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [303] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [304] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [305] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [306] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [307] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [308] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [309] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [310] [311] [312] [313] [314] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [315] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [316] [317] [318] [319] [320] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [321] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [322] [323] [324] [325] [326] [327] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [328] [329] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [330] [331] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [332] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [333] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [334] [335] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [336] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [337] [338] [339] [340] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [341] [342] [343] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [344] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [345] [346] [347] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [348] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [349] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [350] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [351] [352] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28788--28788 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [353] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28923--28923 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28924--28924 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [354] [355] [356] [357] [358] [359] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29438--29438 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29440--29440 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [360] [361] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] [362] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29691--29691 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29700--29700 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29714--29714 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] [363] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] [364] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 29884--29884 [][] [365] [366] Underfull \hbox (badness 10000) in paragraph at lines 29970--29970 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29971--29971 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 30001--30001 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 30002--30002 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [367] [368] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30192--30192 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30193--30193 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [369] [370] [371] [372] [373] [374] [375] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30757--30757 [][] [376] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30786--30786 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] [377] [378] [379] [380] [381] [382] Chapter 5 [383] [384] [385] [386] [387] Chapter 6 [388] [389] Chapter 7 [390] (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [391] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [392] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/cmb_fl_grp.sh [393] Overfull \hbox (32.18782pt too wide) in paragraph at lines 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(/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/gsl_rgr.nco Overfull \hbox (26.43913pt too wide) in paragraph at lines 5--5 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21--21 [][] [404]) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/ann_avg_grp.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 12--12 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15--15 [][] [405]) [406] (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/mcc.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 20--20 [][][][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21--21 [][][] [407] Overfull \hbox (72.42863pt too wide) in paragraph at lines 41--41 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 48--48 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 49--49 [][] Overfull \hbox (83.92601pt too 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lines 8--8 [][][] [413] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [414] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [415] [416] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32288--32288 [][] Chapter 9 [417] [418] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [419] [420] [421] [422] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32598--32598 [][] [423] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [424] Chapter 10 [425] [426] (General Index) [427] [428] [429] [430] ) (see the transcript file for additional information) Output written on nco.pdf (434 pages, 1679010 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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climatological monthly means into NH winter[] [100] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8466--8466 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8468--8468 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 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too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [160] [161] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14550--14550 [][] [175] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14590--14590 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14607--14607 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [176] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14636--14636 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [177] [178] [179] [180] Overfull \hbox (106.92076pt too wide) in paragraph at lines 14907--14907 [][] [181] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15012--15012 [][] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 15031--15031 [][] [183] [184] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15202--15202 [][] [185] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [218] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [219] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [238] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [296] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [298] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [300] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [302] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [303] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [304] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [305] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [306] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [307] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [308] [309] [310] [311] [312] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [313] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [314] [315] [316] [317] [318] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [319] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [320] [321] [322] [323] [324] [325] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [326] [327] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [328] [329] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [330] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [331] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [334] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [335] [336] [337] [338] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [339] [340] [341] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [342] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [343] [344] [345] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [347] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [348] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [349] [350] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] 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wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [413] [414] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32288--32288 [][] Chapter 9 [415] [416] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [417] [418] [419] [420] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32598--32598 [][] [421] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [422] Chapter 10 [423] [424] (General Index) [425] [426] (./nco.cps [427] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [428] [429] [430] [431] [432] Overfull \hbox (37.49283pt too wide) in paragraph at lines 778--778 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2182--2182 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2188--2188 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [446] [447] [448] [449]) [450] ) (see the transcript file for additional information)< /usr/share/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb> Output written on nco.pdf (458 pages, 1961284 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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lines 7339--7339 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (302.37614pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7339--7339 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7339--7339 [][] 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(55.18257pt too wide) in paragraph at lines 7523--7523 [][] Underfull \hbox (badness 10000) in paragraph at lines 7557--7565 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [89] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7740--7740 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7740--7740 [][] [91] [92] [93] [94] [95] [96] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8262--8262 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8262--8262 [][] [97] [98] [99] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8402--8402 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8461--8461 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [100] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8466--8466 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8468--8468 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8487--8487 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8490--8490 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8491--8491 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8492--8492 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [101] [102] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8659--8659 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8659--8659 [][] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] Overfull \hbox (60.93126pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 9605--9605 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9630--9630 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9630--9630 [][] [115] [116] [117] [118] [119] [120] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10033--10033 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10033--10033 [][] [121] [122] [123] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10245--10245 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10245--10245 [][] [124] [125] [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 10690--10697 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [130] [131] [132] [133] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11153--11153 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [134] [135] [136] [137] [138] [139] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11564--11564 [][] [140] [141] [142] [143] [144] [145] [146] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12280--12280 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [147] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12287--12287 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [148] [149] [150] [151] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12666--12666 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12667--12667 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12668--12668 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12669--12669 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12677--12677 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [152] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12719--12719 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [153] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12794--12794 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [154] [155] [156] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12982--12982 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [157] [158] [159] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13234--13234 [][] [160] [161] Underfull \hbox (badness 6741) in paragraph at lines 13472--13517 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13886--13907 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14389--14389 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14392--14392 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14550--14550 [][] [175] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14590--14590 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14607--14607 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [176] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14636--14636 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [177] [178] [179] [180] Overfull \hbox (106.92076pt too wide) in paragraph at lines 14907--14907 [][] [181] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15012--15012 [][] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 15031--15031 [][] [183] [184] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15202--15202 [][] [185] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15228--15228 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15240--15240 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15289--15289 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15289--15289 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15541--15541 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15683--15683 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15809--15818 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15828--15828 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15870--15870 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15870--15870 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15870--15870 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15959--15959 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15984--15984 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16186--16186 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16203--16203 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16336--16336 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16344--16344 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16405--16405 [][] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16488--16488 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16614--16614 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16631--16631 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16664--16664 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16948--16949 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16956--16957 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16960--16961 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16964--16965 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16968--16969 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16984--16985 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16989--16990 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 17007--17007 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 17008--17008 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 17015--17015 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 17040--17041 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17119--17120 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17120--17121 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17121--17122 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17122--17122 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17122--17123 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17131--17132 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17140--17141 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17141--17141 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17143--17144 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17144--17144 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17205--17205 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] Underfull \hbox (badness 10000) in paragraph at lines 17282--17284 []@texttt status=@textbf gsl[]fit[]linear [218] Underfull \hbox (badness 10000) in paragraph at lines 17295--17296 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17313--17314 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ Overfull \hbox (14.94176pt too wide) in paragraph at lines 17338--17338 [][] [219] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17365--17365 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17365--17365 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17381--17381 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17382--17382 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17383--17383 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17390--17390 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17391--17391 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17392--17392 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17498--17498 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17500--17500 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 18023--18039 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 18083--18099 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18169--18179 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18382--18382 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18382--18382 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18464--18464 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18470--18470 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19102--19102 [][] [238] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19636--19636 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19656--19656 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19660--19660 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19664--19664 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19713--19713 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19929--19929 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19929--19929 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20302--20302 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20305--20305 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20306--20306 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20307--20307 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20316--20316 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20497--20497 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20497--20497 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20771--20771 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20772--20772 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21041--21041 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 21043--21043 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21045--21045 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21084--21084 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 21086--21102 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21142--21142 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21187--21187 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21371--21371 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21372--21372 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21402--21402 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21408--21408 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21409--21409 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21446--21446 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21548--21548 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21555--21555 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21557--21557 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21625--21625 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21631--21631 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21658--21658 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21658--21658 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21885--21885 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22197--22197 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22203--22203 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22444--22444 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] Overfull \hbox (43.68523pt too wide) in paragraph at lines 22470--22470 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr p@texttt [,[]]] [--gaa ...] [--gad @textttsl att@texttt [,[]]][] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22717--22717 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22764--22764 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22765--22765 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (37.93654pt too wide) in paragraph at lines 22769--22769 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga a ...] [--gad @textttsl att@texttt [,[]]] [--grp_xtr_var_xcl][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22972--22972 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22973--22973 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22976--22976 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22977--22977 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23061--23061 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23181--23181 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23244--23244 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23244--23244 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23323--23323 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23363--23363 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23363--23363 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23363--23363 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23458--23458 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23494--23494 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23526--23526 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23526--23526 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23558--23558 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23594--23594 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23594--23594 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23662--23662 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23760--23760 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23781--23781 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23795--23795 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23796--23796 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23797--23797 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23798--23798 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23799--23799 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23800--23800 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23801--23801 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23886--23886 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23929--23929 [][] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 24032--24032 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 24032--24032 [][] [296] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 24062--24062 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24062--24062 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24127--24127 [][] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24166--24166 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24166--24166 [][] [298] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24166--24166 [][] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24330--24330 [][] [300] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24412--24412 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24415--24415 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24420--24420 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24532--24532 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24540--24540 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 24540--24540 [][] [302] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24606--24606 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24676--24676 [][] [303] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24719--24719 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24719--24719 [][] Underfull \hbox (badness 10000) in paragraph at lines 24734--24749 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24767--24767 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24767--24767 [][] [304] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24844--24844 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24857--24857 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24865--24865 [][] [305] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24969--24969 [][] [306] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (997.96736pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24969--24969 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24969--24969 [][] [307] Overfull \hbox (26.43913pt too wide) in paragraph at lines 25050--25050 []@texttt # Change values to be sure original values are not copied in followi ng step[] [308] [309] [310] [311] [312] Underfull \hbox (badness 10000) in paragraph at lines 25466--25471 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [313] Underfull \hbox (badness 10000) in paragraph at lines 25472--25478 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [314] [315] [316] [317] [318] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25856--25856 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25869--25869 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [319] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25926--25926 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [320] [321] [322] [323] [324] [325] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26416--26416 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [326] [327] Underfull \hbox (badness 6741) in paragraph at lines 26695--26706 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [328] [329] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26977--26977 [][] [330] Underfull \hbox (badness 10000) in paragraph at lines 27067--27069 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 27070--27075 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv [331] Underfull \hbox (badness 10000) in paragraph at lines 27079--27081 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 27082--27084 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 27085--27087 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 27088--27090 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27260--27260 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27260--27260 [][] Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27275--27295 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27275--27295 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . [334] Overfull \hbox (44.01453pt too wide) in paragraph at lines 27312--27312 [][] [335] [336] [337] [338] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27733--27733 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27742--27742 [][] [339] [340] [341] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27981--27981 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28054--28054 [][] [342] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28090--28090 [][] [343] [344] [345] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28381--28443 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28381--28443 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28499--28499 [][] [347] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28522--28522 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28600--28600 [][] [348] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28647--28647 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28647--28647 [][] [349] [350] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28788--28788 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [351] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28923--28923 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28924--28924 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [352] [353] [354] [355] [356] [357] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29438--29438 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29440--29440 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [358] [359] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29628--29628 [][] [360] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29691--29691 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29700--29700 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29714--29714 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] [361] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] [362] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29829--29829 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29884--29884 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 29884--29884 [][] [363] [364] Underfull \hbox (badness 10000) in paragraph at lines 29970--29970 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29971--29971 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 30001--30001 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 30002--30002 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [365] [366] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30192--30192 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30193--30193 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [367] [368] [369] [370] [371] [372] [373] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30745--30745 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30757--30757 [][] [374] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30786--30786 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30805--30805 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30831--30831 [][] [375] [376] [377] [378] [379] [380] Chapter 5 [381] [382] [383] [384] [385] Chapter 6 [386] [387] Chapter 7 [388] (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [389] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [390] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/cmb_fl_grp.sh [391] Overfull \hbox (32.18782pt too wide) in paragraph at lines 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(/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/gsl_rgr.nco Overfull \hbox (26.43913pt too wide) in paragraph at lines 5--5 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21--21 [][] [402]) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/ann_avg_grp.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 12--12 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15--15 [][] [403]) [404] (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/mcc.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 20--20 [][][][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21--21 [][][] [405] Overfull \hbox (72.42863pt too wide) in paragraph at lines 41--41 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 48--48 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 49--49 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 51--51 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 52--52 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 61--61 [][][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 63--63 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 68--68 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 71--71 [][] [406] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 77--77 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/mcc_grp.sh [407]) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/rgr.sh [408] Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 6--6 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10--10 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/bi_interp.nco [409] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [410] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [411] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [412] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [413] [414] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32288--32288 [][] Chapter 9 [415] [416] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [417] [418] [419] [420] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32598--32598 [][] [421] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32598--32598 [][] [422] Chapter 10 [423] [424] (General Index) [425] [426] (./nco.cps [427] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [428] [429] [430] [431] [432] Overfull \hbox (37.49283pt too wide) in paragraph at lines 778--778 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2182--2182 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2188--2188 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [446] [447] [448] [449]) [450] ) (see the transcript file for additional information)< /usr/share/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb> Output written on nco.pdf (458 pages, 1961227 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.pdf make: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.Fb7m6T + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + '[' 1 -eq 1 ']' + '[' /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT '!=' / ']' + rm -rf /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT ++ dirname /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT + mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + mkdir /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.6 + '[' 1 -eq 1 ']' + /usr/bin/make install DESTDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT 'INSTALL=/usr/bin/install -p' Making install in data make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' /usr/bin/install -p ncclimo ncremap ncz2psx ncchecker '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/data' Making install in src make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' Making install in nco make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco.la '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco-5.3.6.so /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64/libnco-5.3.6.so libtool: install: (cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64 && { ln -s -f libnco-5.3.6.so libnco.so || { rm -f libnco.so && ln -s libnco-5.3.6.so libnco.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco.lai /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64/libnco.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncatted /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncbo /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncecat /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncflint /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncks /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncpdq /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncra /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncrename /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncwa /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncwa /usr/bin/make install-exec-hook make[4]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[4]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco' Making install in nco_c++ make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco_c++.la '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco_c++-5.3.6.so /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64/libnco_c++-5.3.6.so libtool: install: (cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64 && { ln -s -f libnco_c++-5.3.6.so libnco_c++.so || { rm -f libnco_c++.so && ln -s libnco_c++-5.3.6.so libnco_c++.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco_c++.lai /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/lib64/libnco_c++.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/include/nco' /usr/bin/install -p -m 644 libnco_c++.hh nco_dmn.hh nco_hgh.hh nco_var.hh nco_att.hh nco_fl.hh nco_utl.hh '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/include/nco' make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco_c++' Making install in nco++ make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncap2 '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncap2 /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncap2 make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src/nco++' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/src' Making install in man make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/man' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/man' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/man/man1' /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 ncchecker.1 '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/man/man1' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/man' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/man' Making install in doc make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/info' /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 ./nco.info-5 '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/info' install-info --info-dir='/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/info' '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/info/nco.info' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc' make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6' + find /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT -name '*.la' -delete + chrpath -d -k /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncap2 /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncatted /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncbo /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncchecker /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncclimo /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncdiff /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncea /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncecat /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/nces /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncflint /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncks /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncpdq /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncra /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncrcat /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncremap /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncrename /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncwa /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncz2psx `/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncchecker' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncclimo' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncremap' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/bin/ncz2psx' probably isn't an ELF file. elf_open: Exec format error + : + /usr/bin/find-debuginfo -j16 --strict-build-id -m -i --build-id-seed 5.3.6-3.mga10 --unique-debug-suffix -5.3.6-3.mga10.x86_64 --unique-debug-src-base nco-5.3.6-3.mga10.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6 find-debuginfo: starting Extracting debug info from 12 files DWARF-compressing 12 files sepdebugcrcfix: Updated 12 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/nco-5.3.6-3.mga10.x86_64 cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + '[' -n '' ']' + /usr/share/spec-helper/clean_files + '[' -n '' ']' + /usr/share/spec-helper/compress_files .xz + '[' -n '' ']' + /usr/share/spec-helper/relink_symlinks + '[' -n '' ']' + /usr/share/spec-helper/clean_perl + '[' -n '' ']' + /usr/share/spec-helper/lib_symlinks + '[' -n '' ']' + /usr/share/spec-helper/gprintify + '[' -n '' ']' + /usr/share/spec-helper/fix_mo + '[' -n '' ']' + /usr/share/spec-helper/fix_pamd + '[' -n '' ']' + /usr/share/spec-helper/remove_info_dir + '[' -n '' ']' + /usr/share/spec-helper/fix_eol + '[' -n '' ']' + /usr/share/spec-helper/check_desktop_files + '[' -n '' ']' + /usr/share/spec-helper/check_elf_files + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncchecker from /usr/bin/env bash to #!/usr/bin/bash + env -u SOURCE_DATE_EPOCH /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j16 + /usr/lib/rpm/redhat/brp-python-hardlink Reading /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/SPECPARTS/rpm-debuginfo.specpart Processing files: nco-5.3.6-3.mga10.x86_64 Executing(%doc): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.VmWJmj + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + cd nco-5.3.6 + DOCDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/README /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/README.md /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/rtfm.txt /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.html /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.pdf /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.css /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/index.shtml /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/TODO /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/ChangeLog /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco.png /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nco_news.shtml /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/nsf.png /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/doc/nco + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.tGoDVE + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + cd nco-5.3.6 + LICENSEDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/licenses/nco + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/licenses/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/nco-5.3.6/doc/LICENSE /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT/usr/share/licenses/nco + RPM_EC=0 ++ jobs -p + exit 0 Provides: nco = 5.3.6-3.mga10 nco(x86-64) = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.28()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libnco-5.3.6.so()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: lib64nco5.3.6-5.3.6-3.mga10.x86_64 Provides: lib64nco5.3.6 = 5.3.6-3.mga10 lib64nco5.3.6(x86-64) = 5.3.6-3.mga10 libnco-5.3.6.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.28()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnetcdf.so.22()(64bit) libudunits2.so.0()(64bit) Processing files: lib64nco_c++5.3.6-5.3.6-3.mga10.x86_64 Provides: lib64nco_c++5.3.6 = 5.3.6-3.mga10 lib64nco_c++5.3.6(x86-64) = 5.3.6-3.mga10 libnco_c++-5.3.6.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: lib64nco-devel-5.3.6-3.mga10.x86_64 Provides: devel(libnco-5.3.6(64bit)) devel(libnco_c++-5.3.6(64bit)) lib64nco-devel = 5.3.6-3.mga10 lib64nco-devel(x86-64) = 5.3.6-3.mga10 nco-devel = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: devel(libgcc_s(64bit)) devel(libgomp(64bit)) devel(libgsl(64bit)) devel(libm(64bit)) devel(libnetcdf(64bit)) devel(libstdc++(64bit)) devel(libudunits2(64bit)) Processing files: nco-debugsource-5.3.6-3.mga10.x86_64 Provides: nco-debugsource = 5.3.6-3.mga10 nco-debugsource(x86-64) = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debuginfo-5.3.6-3.mga10.x86_64 Provides: debuginfo(build-id) = 13060efbe0041b8ea88a203d99e6d41ff40f072d debuginfo(build-id) = 1f21199984c3f3cbc31955e1184bce9df4029d6f debuginfo(build-id) = 27f63681ae0219e67d3668a2a4b8c358b2cd8822 debuginfo(build-id) = 3615e0f1946688001de4273a7429e102394f9890 debuginfo(build-id) = 4d4f2aa4ae5ce5f4a791a5cfb1b1630c1936e1fa debuginfo(build-id) = 6be654a2400352aabf44ee8892049ae812140b56 debuginfo(build-id) = b173d6a44482213edd45beeab06e213bafcc2b69 debuginfo(build-id) = c2a4d370b583f9ed2135314ba1293c3bf4a668f1 debuginfo(build-id) = cb9101a042fe0e49184c534b1823e230c10ff55c debuginfo(build-id) = cec7bc32ef2ffa36871d513e77e7c75721366c59 nco-debuginfo = 5.3.6-3.mga10 nco-debuginfo(x86-64) = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.6-3.mga10 Processing files: lib64nco5.3.6-debuginfo-5.3.6-3.mga10.x86_64 Provides: debuginfo(build-id) = c88d92adfdcf7fe459792360a559a8fb6bb120c8 lib64nco5.3.6-debuginfo = 5.3.6-3.mga10 lib64nco5.3.6-debuginfo(x86-64) = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.6-3.mga10 Processing files: lib64nco_c++5.3.6-debuginfo-5.3.6-3.mga10.x86_64 Provides: debuginfo(build-id) = ee987926f2a1793abf17ec4e82625b3273d5f01c lib64nco_c++5.3.6-debuginfo = 5.3.6-3.mga10 lib64nco_c++5.3.6-debuginfo(x86-64) = 5.3.6-3.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.6-3.mga10 Checking for unpackaged file(s): /usr/lib/rpm/check-files /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build/BUILDROOT Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco-devel-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco_c++5.3.6-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco_c++5.3.6-debuginfo-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco5.3.6-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco5.3.6-debuginfo-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-debugsource-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-5.3.6-3.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-debuginfo-5.3.6-3.mga10.x86_64.rpm Executing(rmbuild): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.DUyyOE + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + test -d /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + rm -rf /home/pterjan/rpmbuild/BUILD/nco-5.3.6-build + RPM_EC=0 ++ jobs -p + exit 0 D: [iurt_root_command] Success!