D: [iurt_root_command] chroot Building target platforms: x86_64 Building for target x86_64 Installing /home/pterjan/rpmbuild/SRPMS/openbabel-3.1.1-19.mga10.src.rpm Executing(%mkbuilddir): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.5bRIBV Executing(%prep): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.Eih0zm + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + rm -rf openbabel-3.1.1 + /usr/lib/rpm/rpmuncompress -x /home/pterjan/rpmbuild/SOURCES/openbabel-3.1.1-source.tar.bz2 + STATUS=0 + '[' 0 -ne 0 ']' + cd openbabel-3.1.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-perl.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-plugindir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-pkgconfig-and-cmake-libdir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-noswig-rubymethod.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-ruby19-vendorarch.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/openbabel-2.4.1-ruby27.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/0001-CMake-fix-time-check-typo-fixes-build-failure-w-GCC-.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + convert src/GUI/babel.xpm -transparent white babel.png WARNING: The convert command is deprecated in IMv7, use "magick" instead of "convert" or "magick convert" + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.KYR0mi + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd openbabel-3.1.1 + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -Wno-dev -S . -B build -DCMAKE_CXX_FLAGS_RELWITHDEBINFO:STRING=-DNDEBUG -DCMAKE_C_FLAGS_RELWITHDEBINFO:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_LIBDIR:PATH=lib64 -DCMAKE_INSTALL_LIBEXECDIR:PATH=libexec -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_RUNSTATEDIR:PATH=/run -DCMAKE_INSTALL_SYSCONFDIR:PATH=/etc -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DCMAKE_BUILD_TYPE=RelWithDebInfo -DLIB_SUFFIX=64 -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON '-DCMAKE_MODULE_LINKER_FLAGS=-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF -DCMAKE_INSTALL_LIBDIR:PATH=lib64 -DCMAKE_SKIP_INSTALL_RPATH:BOOL=ON -DENABLE_TESTS:BOOL=OFF -DBUILD_GUI:BOOL=ON -DENABLE_VERSIONED_FORMATS=false -DPYTHON_BINDINGS:BOOL=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPERL_BINDINGS:BOOL=ON -DRUBY_BINDINGS:BOOL=ON -DRUN_SWIG=true -DOPENBABEL_USE_SYSTEM_INCHI=ON -- The C compiler identification is GNU 15.1.0 -- The CXX compiler identification is GNU 15.1.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found INCHI: /usr/lib64/libinchi.so -- Found LibXml2: /usr/lib64/libxml2.so (found version "2.13.8") -- Found ZLIB: /usr/lib64/libz.so (found version "1.3.1") -- Found wxWidgets: -L/usr/lib64;-pthread;;;-lwx_baseu-3.2;-lwx_gtk3u_core-3.2 (found version "3.2.7") -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - not found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - not found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - not found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Checking available shared pointer... -- Performing Test HAVE_STD_SHARED_PTR -- Performing Test HAVE_STD_SHARED_PTR - Success -- Performing Test HAVE_STD_TR1_SHARED_PTR -- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success -- Use std::shared_ptr in memory -- Found Boost: /usr/lib64/cmake/Boost-1.87.0/BoostConfig.cmake (found version "1.87.0") found components: program_options iostreams -- Found Eigen3: /usr/include (Required is at least version "2.91.0") -- Found Boost: /usr/lib64/cmake/Boost-1.87.0/BoostConfig.cmake (found version "1.87.0") found components: filesystem iostreams unit_test_framework -- maeparser include dir set as '/usr/include' -- maeparser libraries set as '/usr/lib64/libmaeparser.so' -- Maestro formats will be supported. Using MaeParser libraries at /usr/lib64/libmaeparser.so. -- coordgen include dir set as /usr/include -- coordgen libraries set as '/usr/lib64/libcoordgen.so' -- coordgen templates file set as '/usr/share/coordgen/templates.mae' -- Coordinate generation with Coordgen will be supported. Using Coordgen libraries at /usr/lib64/libcoordgen.so. -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Found RapidJSON: /usr/include (found suitable version "1.1.0", minimum required is "1.1.0") -- JSON formats will be supported. Using RapidJSON 1.1.0 at /usr/include -- Checking for module 'cairo' -- Found cairo, version 1.18.4 -- Found Cairo: /usr/lib64/libcairo.so -- Cairo found. PNG output will be supported. -- Found Boost: /usr/lib64/cmake/Boost-1.87.0/BoostConfig.cmake (found suitable version "1.87.0", minimum required is "1.45.0") found components: system -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost: /usr/lib64/cmake/Boost-1.87.0/BoostConfig.cmake (found version "1.87.0") found components: program_options iostreams -- Looking for getopt -- Looking for getopt - found -- Attempting to build the GUI -- wxWidgets found => GUI will be built -- Found SWIG: /usr/bin/swig (found version "4.3.0") -- Found SWIG: /usr/bin/swig (found suitable version "4.3.0", minimum required is "2.0") -- Found PythonInterp: /usr/bin/python3 (found version "3.13.3") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.3") -- Python bindings will be compiled -- Found Perl: /usr/bin/perl (found version "5.40.1") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.40.1") -- Perl bindings will be compiled -- Found Ruby: /usr/bin/ruby (found suitable version "3.4.2", minimum required is "1.8.0") -- Ruby bindings will be compiled -- Configuring done (6.5s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: BUILD_STATIC_LIBS CMAKE_C_FLAGS_RELEASE CMAKE_C_FLAGS_RELWITHDEBINFO CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build + /usr/bin/cmake --build build -j16 --verbose Change Dir: '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j16 /usr/bin/cmake -S/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 -B/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/CMakeFiles /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/CMakeFiles/openbabel.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/alias.cpp.o -MF CMakeFiles/openbabel.dir/alias.cpp.o.d -o CMakeFiles/openbabel.dir/alias.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/alias.cpp [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/bitvec.cpp.o -MF CMakeFiles/openbabel.dir/bitvec.cpp.o.d -o CMakeFiles/openbabel.dir/bitvec.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/bitvec.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/atom.cpp.o -MF CMakeFiles/openbabel.dir/atom.cpp.o.d -o CMakeFiles/openbabel.dir/atom.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/atom.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/bond.cpp.o -MF CMakeFiles/openbabel.dir/bond.cpp.o.d -o CMakeFiles/openbabel.dir/bond.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/bond.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/canon.cpp.o -MF CMakeFiles/openbabel.dir/canon.cpp.o.d -o CMakeFiles/openbabel.dir/canon.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/canon.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/elements.cpp.o [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.cpp.o [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/data.cpp.o -MF CMakeFiles/openbabel.dir/data.cpp.o.d -o CMakeFiles/openbabel.dir/data.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/data.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS 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-fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/chains.cpp.o -MF CMakeFiles/openbabel.dir/chains.cpp.o.d -o CMakeFiles/openbabel.dir/chains.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/chains.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/chargemodel.cpp.o -MF CMakeFiles/openbabel.dir/chargemodel.cpp.o.d -o CMakeFiles/openbabel.dir/chargemodel.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/chargemodel.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/data_utilities.cpp.o -MF CMakeFiles/openbabel.dir/data_utilities.cpp.o.d -o CMakeFiles/openbabel.dir/data_utilities.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/data_utilities.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/descriptor.cpp.o -MF CMakeFiles/openbabel.dir/descriptor.cpp.o.d -o CMakeFiles/openbabel.dir/descriptor.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptor.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/elements.cpp.o -MF CMakeFiles/openbabel.dir/elements.cpp.o.d -o CMakeFiles/openbabel.dir/elements.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/elements.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/fingerprint.cpp.o -MF CMakeFiles/openbabel.dir/fingerprint.cpp.o.d -o CMakeFiles/openbabel.dir/fingerprint.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprint.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/forcefield.cpp.o -MF CMakeFiles/openbabel.dir/forcefield.cpp.o.d -o CMakeFiles/openbabel.dir/forcefield.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefield.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/chargemodel.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/fingerprint.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprint.cpp:27: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprint.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefield.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_tree.h:67, from /usr/include/c++/15/set:64, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefield.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptor.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptor.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/alias.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/alias.cpp:16: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/format.cpp.o -MF CMakeFiles/openbabel.dir/format.cpp.o.d -o CMakeFiles/openbabel.dir/format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/format.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/builder.cpp:31: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/builder.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/builder.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/generic.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/generic.cpp.o -MF CMakeFiles/openbabel.dir/generic.cpp.o.d -o CMakeFiles/openbabel.dir/generic.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/generic.cpp [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/graphsym.cpp.o -MF CMakeFiles/openbabel.dir/graphsym.cpp.o.d -o CMakeFiles/openbabel.dir/graphsym.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/graphsym.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/format.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/grid.cpp.o [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/grid.cpp.o -MF CMakeFiles/openbabel.dir/grid.cpp.o.d -o CMakeFiles/openbabel.dir/grid.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/grid.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/griddata.cpp.o -MF CMakeFiles/openbabel.dir/griddata.cpp.o.d -o CMakeFiles/openbabel.dir/griddata.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/griddata.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/isomorphism.cpp.o -MF CMakeFiles/openbabel.dir/isomorphism.cpp.o.d -o CMakeFiles/openbabel.dir/isomorphism.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/isomorphism.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/kekulize.cpp.o -MF CMakeFiles/openbabel.dir/kekulize.cpp.o.d -o CMakeFiles/openbabel.dir/kekulize.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/kekulize.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/locale.cpp.o -MF CMakeFiles/openbabel.dir/locale.cpp.o.d -o CMakeFiles/openbabel.dir/locale.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/locale.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/matrix.cpp.o -MF CMakeFiles/openbabel.dir/matrix.cpp.o.d -o CMakeFiles/openbabel.dir/matrix.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/matrix.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o -MF CMakeFiles/openbabel.dir/mcdlutil.cpp.o.d -o CMakeFiles/openbabel.dir/mcdlutil.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/mcdlutil.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/molchrg.cpp.o -MF CMakeFiles/openbabel.dir/molchrg.cpp.o.d -o CMakeFiles/openbabel.dir/molchrg.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/molchrg.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/mcdlutil.cpp:27: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/mcdlutil.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/mol.cpp.o -MF 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/obconversion.cpp.o -MF CMakeFiles/openbabel.dir/obconversion.cpp.o.d -o CMakeFiles/openbabel.dir/obconversion.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obconversion.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/oberror.cpp.o -MF CMakeFiles/openbabel.dir/oberror.cpp.o.d -o CMakeFiles/openbabel.dir/oberror.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/oberror.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL 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src/CMakeFiles/openbabel.dir/obiter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/obiter.cpp.o -MF CMakeFiles/openbabel.dir/obiter.cpp.o.d -o CMakeFiles/openbabel.dir/obiter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obiter.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/obutil.cpp.o -MF CMakeFiles/openbabel.dir/obutil.cpp.o.d -o CMakeFiles/openbabel.dir/obutil.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obutil.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/op.cpp.o -MF CMakeFiles/openbabel.dir/op.cpp.o.d -o CMakeFiles/openbabel.dir/op.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/op.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/parsmart.cpp.o -MF CMakeFiles/openbabel.dir/parsmart.cpp.o.d -o CMakeFiles/openbabel.dir/parsmart.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/parsmart.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/patty.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/patty.cpp.o -MF CMakeFiles/openbabel.dir/patty.cpp.o.d -o CMakeFiles/openbabel.dir/patty.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/patty.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obconversion.cpp:48: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obconversion.cpp:37: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/op.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/phmodel.cpp.o -MF CMakeFiles/openbabel.dir/phmodel.cpp.o.d -o CMakeFiles/openbabel.dir/phmodel.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/phmodel.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/plugin.cpp.o -MF CMakeFiles/openbabel.dir/plugin.cpp.o.d -o CMakeFiles/openbabel.dir/plugin.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/plugin.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/pointgroup.cpp.o -MF CMakeFiles/openbabel.dir/pointgroup.cpp.o.d -o CMakeFiles/openbabel.dir/pointgroup.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/pointgroup.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/query.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/query.cpp.o -MF CMakeFiles/openbabel.dir/query.cpp.o.d -o CMakeFiles/openbabel.dir/query.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/query.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/rand.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/rand.cpp.o -MF CMakeFiles/openbabel.dir/rand.cpp.o.d -o CMakeFiles/openbabel.dir/rand.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/rand.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/plugin.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o -MF CMakeFiles/openbabel.dir/reactionfacade.cpp.o.d -o CMakeFiles/openbabel.dir/reactionfacade.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/reactionfacade.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/query.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/bond.h:31, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/query.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/query.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/residue.cpp.o -MF CMakeFiles/openbabel.dir/residue.cpp.o.d -o CMakeFiles/openbabel.dir/residue.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/residue.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/ring.cpp.o -MF CMakeFiles/openbabel.dir/ring.cpp.o.d -o CMakeFiles/openbabel.dir/ring.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ring.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/rotamer.cpp.o -MF CMakeFiles/openbabel.dir/rotamer.cpp.o.d -o CMakeFiles/openbabel.dir/rotamer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/rotamer.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/rotor.cpp.o -MF CMakeFiles/openbabel.dir/rotor.cpp.o.d -o CMakeFiles/openbabel.dir/rotor.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/rotor.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/spectrophore.cpp.o -MF CMakeFiles/openbabel.dir/spectrophore.cpp.o.d -o CMakeFiles/openbabel.dir/spectrophore.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/spectrophore.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/tautomer.cpp.o -MF CMakeFiles/openbabel.dir/tautomer.cpp.o.d -o CMakeFiles/openbabel.dir/tautomer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/tautomer.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/tokenst.cpp.o -MF CMakeFiles/openbabel.dir/tokenst.cpp.o.d -o CMakeFiles/openbabel.dir/tokenst.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/tokenst.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/transform.cpp.o -MF CMakeFiles/openbabel.dir/transform.cpp.o.d -o CMakeFiles/openbabel.dir/transform.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/transform.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/typer.cpp.o -MF CMakeFiles/openbabel.dir/typer.cpp.o.d -o CMakeFiles/openbabel.dir/typer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/typer.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/tautomer.cpp:26: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/tautomer.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/tautomer.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o -MF CMakeFiles/openbabel.dir/obmolecformat.cpp.o.d -o CMakeFiles/openbabel.dir/obmolecformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obmolecformat.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/conformersearch.cpp.o -MF CMakeFiles/openbabel.dir/conformersearch.cpp.o.d -o CMakeFiles/openbabel.dir/conformersearch.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/conformersearch.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/confsearch.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/confsearch.cpp.o -MF CMakeFiles/openbabel.dir/confsearch.cpp.o.d -o CMakeFiles/openbabel.dir/confsearch.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/transform.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/transform.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/distgeom.cpp.o -MF CMakeFiles/openbabel.dir/distgeom.cpp.o.d -o CMakeFiles/openbabel.dir/distgeom.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/distgeom.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -MF CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o.d -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/dlhandler_unix.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/obmolecformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/depict/depict.cpp.o -MF CMakeFiles/openbabel.dir/depict/depict.cpp.o.d -o CMakeFiles/openbabel.dir/depict/depict.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/depict.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/atom.h:30, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o -MF CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o.d -o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/svgpainter.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o -MF CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o.d -o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/math/matrix3x3.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o -MF CMakeFiles/openbabel.dir/math/spacegroup.cpp.o.d -o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/math/spacegroup.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o -MF CMakeFiles/openbabel.dir/math/transform3d.cpp.o.d -o CMakeFiles/openbabel.dir/math/transform3d.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/math/transform3d.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/vector3.cpp.o -MF CMakeFiles/openbabel.dir/math/vector3.cpp.o.d -o CMakeFiles/openbabel.dir/math/vector3.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/math/vector3.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/math/align.cpp.o -MF 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/conformersearch.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o -MF CMakeFiles/openbabel.dir/stereo/stereo.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/stereo.cpp [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o -MF CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/tetranonplanar.cpp [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o -MF CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/tetraplanar.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp: In constructor 'OpenBabel::OBDiversePoses::OBDiversePoses(const OpenBabel::OBMol&, double, bool)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp:134:66: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = less; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 134 | vec.erase(std::remove_if(vec.begin(), vec.end(), std::bind2nd(std::less(), (cutoff + 0.1) )), vec.end()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o -MF CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/squareplanar.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/distgeom.cpp:38: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/distgeom.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/distgeom.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp: In member function 'int OpenBabel::OBForceField::DiverseConfGen(double, unsigned int, double, bool)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/confsearch.cpp:444:77: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = plus; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 444 | transform(_energies.begin(), _energies.end(), _energies.begin(), bind2nd(std::plus(), energy_offset)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o -MF CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/cistrans.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o -MF CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/tetrahedral.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o -MF CMakeFiles/openbabel.dir/stereo/perception.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/perception.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o -MF CMakeFiles/openbabel.dir/stereo/facade.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/facade.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/facade.cpp [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o -MF CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o.d -o CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/gen3dstereohelper.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/gen3dstereohelper.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/gen3dstereohelper.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/gen3dstereohelper.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp: In function 'void OpenBabel::StereoRefToImplicit(OBMol&, OBStereo::Ref)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp:2973:16: warning: 'template class std::binder1st' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2973 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ^~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/stereo/stereo.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/stereo/tetranonplanar.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/stereo/tetrahedral.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp:26: /usr/include/c++/15/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp:2973:88: warning: 'std::binder1st<_Operation> std::bind1st(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2973 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp: In function 'void OpenBabel::ImplicitRefToStereo(OBMol&, OBStereo::Ref, OBStereo::Ref)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp:3005:16: warning: 'template class std::binder1st' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 3005 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ^~~~~~~~~ /usr/include/c++/15/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/stereo/perception.cpp:3005:93: warning: 'std::binder1st<_Operation> std::bind1st(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 3005 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 17%] Linking CXX shared library ../lib64/libopenbabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/openbabel.dir/link.d -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libopenbabel.so.7 -o ../lib64/libopenbabel.so.7.0.0 CMakeFiles/openbabel.dir/alias.cpp.o CMakeFiles/openbabel.dir/atom.cpp.o CMakeFiles/openbabel.dir/base.cpp.o CMakeFiles/openbabel.dir/bitvec.cpp.o CMakeFiles/openbabel.dir/bond.cpp.o 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CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o CMakeFiles/openbabel.dir/depict/depict.cpp.o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o CMakeFiles/openbabel.dir/math/transform3d.cpp.o CMakeFiles/openbabel.dir/math/vector3.cpp.o CMakeFiles/openbabel.dir/math/align.cpp.o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o CMakeFiles/openbabel.dir/stereo/perception.cpp.o CMakeFiles/openbabel.dir/stereo/facade.cpp.o CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o -lmaeparser -lcoordgen -lm -ldl -lz cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_symlink_library ../lib64/libopenbabel.so.7.0.0 ../lib64/libopenbabel.so.7 ../lib64/libopenbabel.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 17%] Built target openbabel /usr/bin/gmake -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend /usr/bin/gmake -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src 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src/formats/CMakeFiles/asciiformat.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build /usr/bin/gmake -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 17%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o [ 17%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o [ 19%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o [ 19%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o [ 19%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o [ 20%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o [ 20%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o [ 21%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldgaff.cpp [ 21%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addfilename.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger2.cpp [ 21%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmdlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o -MF CMakeFiles/mdlformat.dir/mdlformat.cpp.o.d -o CMakeFiles/mdlformat.dir/mdlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL 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CMakeFiles/mol2format.dir/mol2format.cpp.o.d -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mol2format.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcopyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o -MF CMakeFiles/copyformat.dir/copyformat.cpp.o.d -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/copyformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/eem.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eem.cpp [ 21%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o -MF CMakeFiles/MNAformat.dir/MNAformat.cpp.o.d -o CMakeFiles/MNAformat.dir/MNAformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/MNAformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o -MF CMakeFiles/inchiformat.dir/inchiformat.cpp.o.d -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/inchiformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpdbformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o -MF CMakeFiles/pdbformat.dir/pdbformat.cpp.o.d -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cansmidescriptor.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dasciiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o -MF CMakeFiles/asciiformat.dir/asciiformat.cpp.o.d -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/asciiformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmolreport_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/molreport.dir/molreport.cpp.o -MF CMakeFiles/molreport.dir/molreport.cpp.o.d -o CMakeFiles/molreport.dir/molreport.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molreport.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpainterformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o -MF CMakeFiles/painterformat.dir/painterformat.cpp.o.d -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/painterformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsmilesformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o -MF CMakeFiles/smilesformat.dir/smilesformat.cpp.o.d -o CMakeFiles/smilesformat.dir/smilesformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dnulformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o -MF CMakeFiles/nulformat.dir/nulformat.cpp.o.d -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nulformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addfilename.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addfilename.cpp:18: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eem.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eem.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cansmidescriptor.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cansmidescriptor.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/copyformat.cpp:14: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nulformat.cpp:14: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/painterformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mol2format.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/asciiformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/MNAformat.cpp:31: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molreport.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/inchiformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/inchiformat.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/fingerprint.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger2.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger2.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldgaff.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldgaff.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldgaff.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:35: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:26: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 21%] Linking CXX shared module ../../lib64/copyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/inchiformat.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/inchiformat.h:134:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 134 | : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Linking CXX shared module ../../lib64/nulformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/copyformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 22%] Built target copyformat [ 22%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cmpdfilter.cpp [ 23%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpainterformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -MF CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o.d -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/commandpainter.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addinindex.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/nulformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/nulformat.so CMakeFiles/nulformat.dir/nulformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 24%] Built target nulformat [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addpolarh.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addnonpolarh.cpp [ 24%] Linking CXX shared module ../../lib64/molreport.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 [ 25%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dasciiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -MF CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o.d -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/asciipainter.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/molreport.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 25%] Built target molreport In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cmpdfilter.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/cmpdfilter.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/canonical.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addinindex.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addinindex.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addpolarh.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addpolarh.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addnonpolarh.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/addnonpolarh.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 25%] Linking CXX shared module ../../lib64/painterformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/painterformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 26%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/gasteiger.cpp [ 26%] Built target painterformat In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/canonical.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/none.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/none.cpp [ 26%] Linking CXX shared module ../../lib64/MNAformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/changecell.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:684:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 684 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:684:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:702:70: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 702 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:702:29: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:35: warning: '%+d' directive output may be truncated writing between 2 and 6 bytes into a region of size 3 [-Wformat-truncation=] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:34: note: directive argument in the range [-32768, 32767] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbformat.cpp:739:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 3 and 7 bytes into a destination of size 3 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/groupcontrib.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o [ 26%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/filters.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger3.cpp [ 27%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/inchidescriptor.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/MNAformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 27%] Built target MNAformat [ 27%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/smartsdescriptors.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/gasteiger.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/none.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 27%] Linking CXX shared module ../../lib64/asciiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/filters.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/changecell.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/changecell.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/fingerprint.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger3.cpp:27: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/finger3.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldghemical.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/groupcontrib.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/groupcontrib.cpp:33: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/groupcontrib.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/asciiformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 27%] Built target asciiformat [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delpolarh.cpp [ 28%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/smartsdescriptors.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/smartsdescriptors.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o -MF CMakeFiles/inchiformat.dir/getinchi.cpp.o.d -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/getinchi.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/inchidescriptor.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/inchidescriptor.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Linking CXX shared module ../../lib64/mol2format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/descriptors/inchidescriptor.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/inchiformat.h:134:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 134 | : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/mmff94.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mol2format.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 28%] Built target mol2format [ 29%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/fingerecfp.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delpolarh.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delpolarh.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldghemical.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldghemical.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldghemical.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldmmff94.cpp [ 30%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefielduff.cpp [ 30%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -MF CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o.d -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/unique.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/mmff94.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/fromfile.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:22: note: directive argument in the range [-2147483648, 2147483547] 1709 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/iomanip:47, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:27: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'std::string OpenBabel::MDLFormat::GetTimeDate()' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdlformat.cpp:1709:13: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 11 and 56 bytes into a destination of size 11 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eqeq.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/unique.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/fingerprint.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/fingerecfp.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/oberror.h:26, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/fingerprints/fingerecfp.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefieldmmff94.cpp:31: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake "--color=" [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delnonpolarh.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/fromfile.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/unique.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/inchiformat.h:134:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 134 | : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpovrayformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o -MF CMakeFiles/povrayformat.dir/povrayformat.cpp.o.d -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefielduff.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefielduff.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/forcefields/forcefielduff.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Linking CXX shared module ../lib64/plugin_descriptors.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 [ 32%] Linking CXX shared module ../../lib64/pdbformat.so [ 32%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qeq.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_descriptors.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pdbformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 32%] Built target pdbformat /usr/bin/gmake -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake "--color=" [ 32%] Built target plugin_descriptors gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen2D.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delnonpolarh.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/delnonpolarh.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dreportformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o -MF CMakeFiles/reportformat.dir/reportformat.cpp.o.d -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/reportformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eqeq.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/eqeq.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/fillUC.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Linking CXX shared module ../../lib64/inchiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qeq.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qeq.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen2D.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen2D.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp: In function 'void OpenBabel::OutputCSTBonds(std::ostream&, OBMol&, std::string)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp:526:78: warning: 'std::binder1st<_Operation> std::bind1st(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = char]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 526 | bond_type.erase(remove_if(bond_type.begin(), bond_type.end(), bind1st(equal_to(), '.')), bond_type.end()); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441: /usr/include/c++/15/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/povrayformat.cpp:587:78: warning: 'std::binder1st<_Operation> std::bind1st(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = char]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 587 | bond_type.erase(remove_if(bond_type.begin(), bond_type.end(), bind1st(equal_to(), '.')), bond_type.end()); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake "--color=" [ 33%] Linking CXX shared module ../lib64/plugin_fingerprints.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsvgformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o -MF CMakeFiles/svgformat.dir/svgformat.cpp.o.d -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/svgformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/inchiformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.cpp.o CMakeFiles/inchiformat.dir/getinchi.cpp.o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Built target inchiformat /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/fillUC.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_fingerprints.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 33%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtextformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/textformat.dir/textformat.cpp.o -MF CMakeFiles/textformat.dir/textformat.cpp.o.d -o CMakeFiles/textformat.dir/textformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/textformat.cpp [ 33%] Built target plugin_fingerprints /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/reportformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 34%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtitleformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o -MF CMakeFiles/titleformat.dir/titleformat.cpp.o.d -o CMakeFiles/titleformat.dir/titleformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/titleformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/svgformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 35%] Building CXX object src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dconfabreport_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o -MF CMakeFiles/confabreport.dir/confabreport.cpp.o.d -o CMakeFiles/confabreport.dir/confabreport.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/confabreport.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/textformat.cpp:14: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/titleformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_charges_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -MF CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o.d -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qtpie.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/confabreport.cpp:34: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Linking CXX shared module ../../lib64/titleformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 [ 36%] Linking CXX shared module ../../lib64/textformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/titleformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Linking CXX shared module ../../lib64/reportformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 [ 36%] Built target titleformat /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/textformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build [ 36%] Built target textformat gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 36%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpngformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o -MF CMakeFiles/pngformat.dir/pngformat.cpp.o.d -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pngformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/reportformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings 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-I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o -MF CMakeFiles/acesformat.dir/acesformat.cpp.o.d -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acesformat.cpp [ 37%] Built target reportformat /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend [ 37%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dabinitformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o -MF CMakeFiles/abinitformat.dir/abinitformat.cpp.o.d -o CMakeFiles/abinitformat.dir/abinitformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/abinitformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/chargemodel.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qtpie.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/charges/qtpie.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/dlhandler.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 37%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dadfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o -MF CMakeFiles/adfformat.dir/adfformat.cpp.o.d -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/adfformat.cpp [ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/forcefield.cpp [ 38%] Linking CXX shared module ../../lib64/povrayformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pngformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pngformat.cpp:13: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/povrayformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acesformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 38%] Built target povrayformat /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2865 | snprintf(tcount, 10, "%d", hcount); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2865:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2857:35: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 2857 | snprintf(tcount, 10, "%d", i); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:2857:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/adfformat.cpp:35: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/forcefield.cpp:31: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/abinitformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/adfformat.cpp:29: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/forcefield.cpp:29: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 38%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Daoforceformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -MF CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o.d -o CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/aoforceformat.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp: In member function 'void OpenBabel::OBMol2Cansmi::ToCansmilesString(OpenBabel::OBCanSmiNode*, std::string&, OpenBabel::OBBitVec&, std::vector&, std::vector&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:32: warning: '%d' directive output may be truncated writing between 1 and 11 bytes into a region of size 8 [-Wformat-truncation=] 3531 | snprintf(digits, 8, "%d", bci->ringdigit); | ^~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:31: note: directive argument in the range [-2147483648, 99] 3531 | snprintf(digits, 8, "%d", bci->ringdigit); | ^~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OBMol2Cansmi::ToCansmilesString(OpenBabel::OBCanSmiNode*, std::string&, OpenBabel::OBBitVec&, std::vector&, std::vector&)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smilesformat.cpp:3531:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 2 and 12 bytes into a destination of size 8 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX shared module ../../lib64/svgformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/svgformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 38%] Linking CXX shared module ../../lib64/pngformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/aoforceformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 38%] Built target svgformat [ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen3d.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pngformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Built target pngformat /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcastepformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o -MF CMakeFiles/castepformat.dir/castepformat.cpp.o.d -o CMakeFiles/castepformat.dir/castepformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/castepformat.cpp [ 38%] Linking CXX shared module ../../lib64/mdlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 [ 38%] Linking CXX shared module ../../lib64/confabreport.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/gen3d.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/confabreport.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/confabreport.so CMakeFiles/confabreport.dir/confabreport.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mdlformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 38%] Built target confabreport gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake "--color=" [ 38%] Built target mdlformat /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcrystal09format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o -MF CMakeFiles/crystal09format.dir/crystal09format.cpp.o.d -o CMakeFiles/crystal09format.dir/crystal09format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crystal09format.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddaltonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o -MF CMakeFiles/daltonformat.dir/daltonformat.cpp.o.d -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/daltonformat.cpp [ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/largest.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/largest.cpp [ 38%] Linking CXX shared module ../../lib64/abinitformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/castepformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddmolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o -MF CMakeFiles/dmolformat.dir/dmolformat.cpp.o.d -o CMakeFiles/dmolformat.dir/dmolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dmolformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/abinitformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Built target abinitformat [ 38%] Linking CXX shared module ../../lib64/acesformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 [ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/loader.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/loader.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/acesformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 38%] Built target acesformat In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/daltonformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crystal09format.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crystal09format.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/neutralize.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/largest.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dmolformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/loader.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/loader.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Linking CXX shared module ../../lib64/aoforceformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/neutralize.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/aoforceformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 39%] Built target aoforceformat /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 40%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfchkformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o -MF CMakeFiles/fchkformat.dir/fchkformat.cpp.o.d -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp [ 41%] Linking CXX shared module ../../lib64/smilesformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 [ 41%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opsplit.cpp [ 41%] Linking CXX shared module ../../lib64/castepformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/smilesformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Built target smilesformat /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/castepformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Built target castepformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend [ 41%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -MF CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o.d -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhiaimsformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o [ 41%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgamessformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o -MF CMakeFiles/gamessformat.dir/gamessformat.cpp.o.d -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/optransform.cpp [ 41%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/partialcharges.cpp [ 41%] Linking CXX shared module ../../lib64/daltonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/functional:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:16: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/daltonformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Built target daltonformat /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 41%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgaussformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o -MF CMakeFiles/gaussformat.dir/gaussformat.cpp.o.d -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gaussformat.cpp [ 42%] Linking CXX shared module ../../lib64/adfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opsplit.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o [ 42%] Linking CXX shared module ../../lib64/dmolformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/readconformers.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp: In member function 'virtual bool OpenBabel::FCHKFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:668:43: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = less_equal; _Tp = int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 668 | bind2nd(less_equal(), 0)) || | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:671:43: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater; _Tp = int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 671 | bind2nd(greater(), MxBond)) || | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:674:43: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = less; _Tp = int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 674 | bind2nd(less(), 0)) || | ~~~~~~~^~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fchkformat.cpp:677:43: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater; _Tp = int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 677 | bind2nd(greater(), Natoms))) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/adfformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/sort.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/sort.cpp [ 43%] Built target adfformat /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -MF CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o.d -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausscubeformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/dmolformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Built target dmolformat /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/partialcharges.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -MF CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o.d -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausszmatformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhiaimsformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/optransform.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/optransform.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/parsmart.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/phmodel.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/optransform.h:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gaussformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/data.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gaussformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/readconformers.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/sort.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausscubeformat.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausscubeformat.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Linking CXX shared module ../../lib64/crystal09format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gausszmatformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/sort.cpp:32:28: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 32 | struct Order : public std::binary_function, std::pair, bool> | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/crystal09format.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 43%] Built target crystal09format /usr/bin/gmake -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 44%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgulpformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o -MF CMakeFiles/gulpformat.dir/gulpformat.cpp.o.d -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gulpformat.cpp [ 44%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o [ 44%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opisomorph.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/ophighlight.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gulpformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 44%] Linking CXX shared module ../../lib64/fhiaimsformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 [ 44%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/xout.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/xout.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fhiaimsformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 44%] Built target fhiaimsformat /usr/bin/gmake -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 44%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dhinformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o -MF CMakeFiles/hinformat.dir/hinformat.cpp.o.d -o CMakeFiles/hinformat.dir/hinformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/hinformat.cpp [ 45%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/conformer.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opisomorph.h:15, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opisomorph.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/parsmart.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opisomorph.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/ophighlight.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/parsmart.h:23, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/ophighlight.cpp:16: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/xout.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/hinformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/conformer.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/conformer.cpp:29: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Linking CXX shared module ../lib64/plugin_forcefields.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_forcefields.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Djaguarformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -MF CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o.d -o CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/jaguarformat.cpp [ 46%] Linking CXX shared module ../../lib64/gausszmatformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 [ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opalign.cpp [ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dplugin_ops_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -MF CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o.d -o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opconfab.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gausszmatformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend [ 46%] Built target gausszmatformat /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake "--color=" [ 46%] Linking CXX shared module ../../lib64/fchkformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o [ 46%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmopacformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o -MF CMakeFiles/mopacformat.dir/mopacformat.cpp.o.d -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mopacformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmolproformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o -MF CMakeFiles/molproformat.dir/molproformat.cpp.o.d -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molproformat.cpp [ 46%] Linking CXX shared module ../../lib64/gulpformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 [ 46%] Linking CXX shared module ../../lib64/hinformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fchkformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target fchkformat /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gulpformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/hinformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target gulpformat /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake "--color=" [ 46%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dnwchemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -MF CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o.d -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nwchemformat.cpp [ 46%] Built target hinformat /usr/bin/gmake -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpwscfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -MF CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o.d -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pwscfformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dqchemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o -MF CMakeFiles/qchemformat.dir/qchemformat.cpp.o.d -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/qchemformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/jaguarformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opconfab.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opconfab.cpp:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/op.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opalign.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/ops/opalign.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mopacformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/molproformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/nwchemformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/gausscubeformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pwscfformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/qchemformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/qchemformat.cpp:16: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gausscubeformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target gausscubeformat /usr/bin/gmake -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsiestaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o -MF CMakeFiles/siestaformat.dir/siestaformat.cpp.o.d -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/siestaformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -MF CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o.d -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/turbomoleformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dvaspformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o -MF CMakeFiles/vaspformat.dir/vaspformat.cpp.o.d -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/siestaformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/turbomoleformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxsfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o -MF CMakeFiles/xsfformat.dir/xsfformat.cpp.o.d -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xsfformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/jaguarformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/jaguarformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target jaguarformat /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dzindoformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o -MF CMakeFiles/zindoformat.dir/zindoformat.cpp.o.d -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/zindoformat.cpp /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp:535:35: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = not_equal_to; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 535 | std::bind2nd(std::not_equal_to(), 0.0)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/vaspformat.cpp:589:36: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = divides; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 589 | std::bind2nd(std::divides(), max / 100.0)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xsfformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/pwscfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pwscfformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target pwscfformat /usr/bin/gmake -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/zindoformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmaeformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o -MF CMakeFiles/maeformat.dir/maeformat.cpp.o.d -o CMakeFiles/maeformat.dir/maeformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/maeformat.cpp In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib64/turbomoleformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 [ 46%] Linking CXX shared module ../../lib64/molproformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/turbomoleformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target turbomoleformat /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgamessukformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -MF CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o.d -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessukformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Built target molproformat /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake "--color=" [ 46%] Linking CXX shared module ../lib64/plugin_ops.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 [ 46%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dorcaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o -MF CMakeFiles/orcaformat.dir/orcaformat.cpp.o.d -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/orcaformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o -MF CMakeFiles/APIInterface.dir/APIInterface.cpp.o.d -o CMakeFiles/APIInterface.dir/APIInterface.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/APIInterface.cpp [ 46%] Linking CXX shared module ../../lib64/gamessformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gamessformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_ops.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/neutralize.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 46%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o -MF CMakeFiles/CSRformat.dir/CSRformat.cpp.o.d -o CMakeFiles/CSRformat.dir/CSRformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/CSRformat.cpp [ 46%] Built target plugin_ops /usr/bin/gmake -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake "--color=" [ 46%] Linking CXX shared module ../../lib64/qchemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 47%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DPQSformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o -MF CMakeFiles/PQSformat.dir/PQSformat.cpp.o.d -o CMakeFiles/PQSformat.dir/PQSformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/PQSformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/maeformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/qchemformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 47%] Built target qchemformat /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 48%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -MF CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o.d -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/MCDLformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gamessukformat.cpp:14: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/APIInterface.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/orcaformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Linking CXX shared module ../../lib64/zindoformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/zindoformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/CSRformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Built target zindoformat /usr/bin/gmake -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/PQSformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o [ 49%] Linking CXX shared module ../../lib64/xsfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dalchemyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -MF CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o.d -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/alchemyformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 [ 49%] Linking CXX shared module ../../lib64/APIInterface.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xsfformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target xsfformat /usr/bin/gmake -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/MCDLformat.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dacrformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o -MF CMakeFiles/acrformat.dir/acrformat.cpp.o.d -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acrformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/APIInterface.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target APIInterface /usr/bin/gmake -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Damberformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o -MF CMakeFiles/amberformat.dir/amberformat.cpp.o.d -o CMakeFiles/amberformat.dir/amberformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/amberformat.cpp [ 49%] Linking CXX shared module ../../lib64/mopacformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 [ 49%] Linking CXX shared module ../../lib64/siestaformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mopacformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target mopacformat /usr/bin/gmake -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/siestaformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Built target siestaformat /usr/bin/gmake -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake "--color=" [ 49%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbalstformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o -MF CMakeFiles/balstformat.dir/balstformat.cpp.o.d -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/balstformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/alchemyformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 49%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o [ 50%] Linking CXX shared module ../../lib64/gaussformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbgfformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o -MF CMakeFiles/bgfformat.dir/bgfformat.cpp.o.d -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/bgfformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 [ 50%] Linking CXX shared module ../../lib64/CSRformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gaussformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/amberformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acrformat.cpp:26: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/acrformat.cpp:23: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Built target gaussformat /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/CSRformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build [ 50%] Built target CSRformat gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake "--color=" [ 50%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dboxformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o -MF CMakeFiles/boxformat.dir/boxformat.cpp.o.d -o CMakeFiles/boxformat.dir/boxformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/boxformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 50%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcacaoformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -MF CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o.d -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacaoformat.cpp [ 50%] Linking CXX shared module ../../lib64/PQSformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/balstformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Linking CXX shared module ../../lib64/nwchemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/bgfformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/PQSformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 50%] Built target PQSformat /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 50%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcacheformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o -MF CMakeFiles/cacheformat.dir/cacheformat.cpp.o.d -o CMakeFiles/cacheformat.dir/cacheformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacheformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/nwchemformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 50%] Built target nwchemformat /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 50%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcarformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/carformat.dir/carformat.cpp.o -MF CMakeFiles/carformat.dir/carformat.cpp.o.d -o CMakeFiles/carformat.dir/carformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/carformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/boxformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Linking CXX shared module ../../lib64/alchemyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacaoformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/alchemyformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 50%] Linking CXX shared module ../../lib64/acrformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 [ 51%] Linking CXX shared module ../../lib64/amberformat.so [ 51%] Built target alchemyformat cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcccformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o -MF CMakeFiles/cccformat.dir/cccformat.cpp.o.d -o CMakeFiles/cccformat.dir/cccformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cccformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/acrformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target acrformat /usr/bin/gmake -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/amberformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target amberformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake "--color=" [ 51%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchem3dformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -MF CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o.d -o CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chem3dformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdrawct_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -MF CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o.d -o CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawct.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cacheformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/carformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 51%] Linking CXX shared module ../../lib64/balstformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/balstformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target balstformat /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -MF CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o.d -o CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemtoolformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cccformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawct.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chem3dformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/math/matrix3x3.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chem3dformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 51%] Linking CXX shared module ../../lib64/boxformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/boxformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Linking CXX shared module ../../lib64/cacheformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 [ 51%] Built target boxformat /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcifformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o -MF CMakeFiles/cifformat.dir/cifformat.cpp.o.d -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cifformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cacheformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 51%] Built target cacheformat /usr/bin/gmake -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake "--color=" [ 52%] Linking CXX shared module ../../lib64/bgfformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemtoolformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcofformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o -MF CMakeFiles/cofformat.dir/cofformat.cpp.o.d -o CMakeFiles/cofformat.dir/cofformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cofformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bgfformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 52%] Built target bgfformat /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 53%] Linking CXX shared module ../../lib64/cacaoformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 [ 54%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcrkformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o -MF CMakeFiles/crkformat.dir/crkformat.cpp.o.d -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crkformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cacaoformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Linking CXX shared module ../../lib64/cccformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 [ 55%] Built target cacaoformat /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 55%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcssrformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o -MF CMakeFiles/cssrformat.dir/cssrformat.cpp.o.d -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cssrformat.cpp [ 56%] Linking CXX shared module ../../lib64/carformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cccformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Built target cccformat /usr/bin/gmake -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake "--color=" [ 56%] Linking CXX shared module ../../lib64/chemdrawct.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -MF CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o.d -o CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dlpolyformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cifformat.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/carformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Built target carformat /usr/bin/gmake -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdrawct.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 56%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dexyzformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o -MF CMakeFiles/exyzformat.dir/exyzformat.cpp.o.d -o CMakeFiles/exyzformat.dir/exyzformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/exyzformat.cpp [ 56%] Built target chemdrawct /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake "--color=" [ 57%] Linking CXX shared module ../../lib64/chem3dformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -MF CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o.d -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastsearchformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cofformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/crkformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ [ 57%] Linking CXX shared module ../../lib64/chemtoolformat.so In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chem3dformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Built target chem3dformat /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfastaformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o -MF CMakeFiles/fastaformat.dir/fastaformat.cpp.o.d -o CMakeFiles/fastaformat.dir/fastaformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastaformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/cssrformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemtoolformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Linking CXX shared module ../../lib64/vaspformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 [ 57%] Built target chemtoolformat /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfeatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/featformat.dir/featformat.cpp.o -MF CMakeFiles/featformat.dir/featformat.cpp.o.d -o CMakeFiles/featformat.dir/featformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/featformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/dlpolyformat.cpp:14: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/vaspformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 57%] Built target vaspformat /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 58%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfhformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o -MF CMakeFiles/fhformat.dir/fhformat.cpp.o.d -o CMakeFiles/fhformat.dir/fhformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/exyzformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastsearchformat.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastsearchformat.cpp:16: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 59%] Linking CXX shared module ../../lib64/orcaformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/orcaformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 59%] Built target orcaformat /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fastaformat.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -MF CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o.d -o CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fingerprintformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/featformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fhformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Linking CXX shared module ../../lib64/crkformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 [ 61%] Linking CXX shared module ../../lib64/cssrformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fingerprintformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fingerprintformat.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/crkformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cssrformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 61%] Built target crkformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake "--color=" [ 61%] Built target cssrformat /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 61%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfpsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o -MF CMakeFiles/fpsformat.dir/fpsformat.cpp.o.d -o CMakeFiles/fpsformat.dir/fpsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fpsformat.cpp [ 61%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dfreefracformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o -MF CMakeFiles/freefracformat.dir/freefracformat.cpp.o.d -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/freefracformat.cpp [ 62%] Linking CXX shared module ../../lib64/gamessukformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 [ 62%] Linking CXX shared module ../../lib64/featformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gamessukformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Built target gamessukformat /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/featformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dghemicalformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -MF CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o.d -o CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/ghemicalformat.cpp [ 62%] Built target featformat /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Linking CXX shared module ../../lib64/fhformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 [ 62%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgromos96format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o -MF CMakeFiles/gromos96format.dir/gromos96format.cpp.o.d -o CMakeFiles/gromos96format.dir/gromos96format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gromos96format.cpp [ 62%] Linking CXX shared module ../../lib64/maeformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/maeformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fhformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Built target fhformat /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dgroformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/groformat.dir/groformat.cpp.o -MF CMakeFiles/groformat.dir/groformat.cpp.o.d -o CMakeFiles/groformat.dir/groformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/groformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/maeformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/maeformat.so CMakeFiles/maeformat.dir/maeformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/freefracformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fpsformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/fpsformat.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 62%] Built target maeformat /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -MF CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o.d -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lmpdatformat.cpp [ 62%] Linking CXX shared module ../../lib64/fastaformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/gromos96format.cpp:54: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fastaformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Built target fastaformat /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/ghemicalformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 62%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dlpmdformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -MF CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o.d -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lpmdformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/groformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 62%] Linking CXX shared module ../../lib64/cofformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cofformat.dir/link.txt --verbose=1 [ 62%] Linking CXX shared module ../../lib64/fingerprintformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lmpdatformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 63%] Linking CXX shared module ../../lib64/exyzformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cofformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cofformat.so CMakeFiles/cofformat.dir/cofformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fingerprintformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Built target cofformat /usr/bin/gmake -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake "--color=" [ 63%] Built target fingerprintformat /usr/bin/gmake -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmdffformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o -MF CMakeFiles/mdffformat.dir/mdffformat.cpp.o.d -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdffformat.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmmcifformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -MF CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o.d -o CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmcifformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmmodformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o -MF CMakeFiles/mmodformat.dir/mmodformat.cpp.o.d -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmodformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/lpmdformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 63%] Linking CXX shared module ../../lib64/gromos96format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 [ 63%] Linking CXX shared module ../../lib64/fastsearchformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 [ 63%] Linking CXX shared module ../../lib64/fpsformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/gromos96format.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 63%] Built target gromos96format /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 64%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmoldenformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o -MF CMakeFiles/moldenformat.dir/moldenformat.cpp.o.d -o CMakeFiles/moldenformat.dir/moldenformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/moldenformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fastsearchformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 64%] Built target fastsearchformat /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake "--color=" /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/fpsformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 64%] Built target fpsformat /usr/bin/gmake -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake "--color=" [ 66%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o [ 66%] Linking CXX shared module ../../lib64/freefracformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmpdformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o -MF CMakeFiles/mpdformat.dir/mpdformat.cpp.o.d -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpdformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmcifformat.cpp:19: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmpqcformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -MF CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o.d -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpqcformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mdffformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mmodformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/freefracformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 66%] Built target freefracformat /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 66%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmsiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o -MF CMakeFiles/msiformat.dir/msiformat.cpp.o.d -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msiformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/moldenformat.cpp:35: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/moldenformat.cpp:27: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Linking CXX shared module ../../lib64/ghemicalformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpdformat.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/mpqcformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/ghemicalformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Built target ghemicalformat /usr/bin/gmake -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 67%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dmsmsformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o -MF CMakeFiles/msmsformat.dir/msmsformat.cpp.o.d -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msmsformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msiformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 68%] Linking CXX shared module ../../lib64/dlpolyformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/dlpolyformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Built target dlpolyformat /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dopendxformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o -MF CMakeFiles/opendxformat.dir/opendxformat.cpp.o.d -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/opendxformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msmsformat.cpp:27: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/msmsformat.cpp:26: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 68%] Linking CXX shared module ../../lib64/mpdformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 [ 68%] Linking CXX shared module ../../lib64/mpqcformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/opendxformat.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/opendxformat.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 68%] Linking CXX shared module ../../lib64/mmodformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mpdformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Built target mpdformat /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mpqcformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Doutformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/outformat.dir/outformat.cpp.o -MF CMakeFiles/outformat.dir/outformat.cpp.o.d -o CMakeFiles/outformat.dir/outformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/outformat.cpp [ 68%] Built target mpqcformat [ 68%] Linking CXX shared module ../../lib64/groformat.so /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -MF CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o.d -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pcmodelformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mmodformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Built target mmodformat /usr/bin/gmake -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 68%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -MF CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o.d -o CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/groformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed 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CMakeFiles/MCDLformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables 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-shared -o ../../lib64/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Built target MCDLformat /usr/bin/gmake -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 69%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dposformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/posformat.dir/posformat.cpp.o -MF CMakeFiles/posformat.dir/posformat.cpp.o.d -o CMakeFiles/posformat.dir/posformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/posformat.cpp [ 70%] Linking CXX shared module ../../lib64/msiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 [ 70%] Linking CXX shared module ../../lib64/msmsformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 [ 70%] Linking CXX shared module ../../lib64/lmpdatformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/outformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pcmodelformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/msiformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/msmsformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Built target msmsformat /usr/bin/gmake -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend [ 70%] Built target msiformat gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 70%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o [ 71%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpqrformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o -MF CMakeFiles/pqrformat.dir/pqrformat.cpp.o.d -o CMakeFiles/pqrformat.dir/pqrformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dshelxformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o -MF CMakeFiles/shelxformat.dir/shelxformat.cpp.o.d -o CMakeFiles/shelxformat.dir/shelxformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/shelxformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:24: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/lmpdatformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Built target lmpdatformat /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dsmileyformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o -MF CMakeFiles/smileyformat.dir/smileyformat.cpp.o.d -o CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smileyformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pointcloudformat.cpp:30: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pointcloudformat.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/posformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:16: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/shelxformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/math/matrix3x3.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/shelxformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/smileyformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 71%] Linking CXX shared module ../../lib64/opendxformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 [ 71%] Linking CXX shared module ../../lib64/outformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/opendxformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 71%] Built target opendxformat /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 72%] Linking CXX shared module ../../lib64/moldenformat.so [ 72%] Linking CXX shared module ../../lib64/lpmdformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 [ 72%] Linking CXX shared module ../../lib64/pcmodelformat.so [ 72%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/outformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/outformat.so CMakeFiles/outformat.dir/outformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dstlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o -MF CMakeFiles/stlformat.dir/stlformat.cpp.o.d -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/stlformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 72%] Built target outformat [ 72%] Linking CXX shared module ../../lib64/pointcloudformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 72%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dthermoformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o -MF CMakeFiles/thermoformat.dir/thermoformat.cpp.o.d -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/thermoformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/lpmdformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/moldenformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 72%] Built target lpmdformat [ 72%] Built target moldenformat /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pointcloudformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pcmodelformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake "--color=" [ 72%] Built target pcmodelformat [ 72%] Built target pointcloudformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/wlnformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 72%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o [ 73%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dtinkerformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -MF CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o.d -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/tinkerformat.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dunichemformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o -MF CMakeFiles/unichemformat.dir/unichemformat.cpp.o.d -o CMakeFiles/unichemformat.dir/unichemformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/unichemformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/wlnformat.dir/build.make src/formats/CMakeFiles/wlnformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 73%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o [ 74%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dwlnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/wlnformat.dir/wlnformat.cpp.o -MF CMakeFiles/wlnformat.dir/wlnformat.cpp.o.d -o CMakeFiles/wlnformat.dir/wlnformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/wlnformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dviewmolformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -MF CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o.d -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/viewmolformat.cpp [ 74%] Linking CXX shared module ../../lib64/shelxformat.so [ 75%] Linking CXX shared module ../../lib64/mdffformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 [ 75%] Linking CXX shared module ../../lib64/posformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:511:58: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 511 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:511:21: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:528:66: warning: '%-3s' directive output may be truncated writing between 3 and 15 bytes into a region of size 9 [-Wformat-truncation=] 528 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^~~~ ~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pqrformat.cpp:528:29: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 17 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/stlformat.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/stlformat.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake "--color=" [ 76%] Linking CXX shared module ../../lib64/mmcifformat.so /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/shelxformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxedformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o -MF CMakeFiles/xedformat.dir/xedformat.cpp.o.d -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xedformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mdffformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/thermoformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/thermoformat.cpp:21: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Built target shelxformat /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake "--color=" [ 77%] Built target mdffformat gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/posformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Building CXX object src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dwlnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -MF CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o.d -o CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/wln-nextmove.cpp [ 77%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxyzformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o -MF CMakeFiles/xyzformat.dir/xyzformat.cpp.o.d -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xyzformat.cpp [ 77%] Built target posformat /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 77%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:345:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 345 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:345:15: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:363:60: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 363 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void OpenBabel::OutputAtom(OBAtom*, std::ostream&, unsigned int)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/pdbqtformat.cpp:363:19: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dyasaraformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -MF CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o.d -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/unichemformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/tinkerformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/wlnformat.cpp:18: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/mmcifformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/viewmolformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ [ 77%] Built target mmcifformat In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake "--color=" [ 78%] Linking CXX shared module ../../lib64/cifformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 78%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Drxnformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o -MF CMakeFiles/rxnformat.dir/rxnformat.cpp.o.d -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rxnformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xedformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cifformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xyzformat.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 78%] Built target cifformat /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:34: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 78%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -MF CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o.d -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawcdx.cpp /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemkinformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -MF CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o.d -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemkinformat.cpp [ 79%] Linking CXX shared module ../../lib64/stlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 [ 79%] Linking CXX shared module ../../lib64/unichemformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 [ 79%] Linking CXX shared module ../../lib64/viewmolformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/stlformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/unichemformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 79%] Built target stlformat [ 79%] Built target unichemformat /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake "--color=" In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rxnformat.cpp:26: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rxnformat.cpp:18: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build /usr/bin/gmake -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Drinchiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -MF CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o.d -o CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rinchiformat.cpp [ 80%] Linking CXX shared module ../../lib64/pqrformat.so [ 80%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o [ 80%] Built target viewmolformat cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Drsmiformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -MF CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o.d -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rsmiformat.cpp /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake "--color=" [ 80%] Linking CXX shared module ../../lib64/xedformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpng2format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/png2format.dir/png2format.cpp.o -MF CMakeFiles/png2format.dir/png2format.cpp.o.d -o CMakeFiles/png2format.dir/png2format.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/png2format.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemdrawcdx.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:572:36: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 572 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } | ^ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/yasaraformat.cpp:572:15: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 5 and 12 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pqrformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xedformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Built target pqrformat /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake "--color=" [ 81%] Built target xedformat /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Linking CXX shared module ../../lib64/thermoformat.so /usr/bin/gmake -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o -MF CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o.d -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cdxmlformat.cpp [ 81%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -MF CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o.d -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlformat.cpp [ 81%] Linking CXX shared module ../../lib64/tinkerformat.so In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemkinformat.cpp:31: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/chemkinformat.cpp:18: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/thermoformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 81%] Linking CXX shared module ../../lib64/yasaraformat.so gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 [ 81%] Built target thermoformat [ 81%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o -MF CMakeFiles/cmlformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/tinkerformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 81%] Built target tinkerformat /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 82%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchem_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -MF CMakeFiles/pubchem.dir/xml/pubchem.cpp.o.d -o CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/pubchem.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/png2format.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/yasaraformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rinchiformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rinchiformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Linking CXX shared module ../../lib64/xyzformat.so [ 83%] Built target yasaraformat cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rsmiformat.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ [ 83%] Linking CXX shared module ../../lib64/smileyformat.so In file included from /usr/include/c++/15/string:51, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/rsmiformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -MF CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o.d -o CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xmlformat.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cdxmlformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xyzformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Built target xyzformat /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/smileyformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -MF CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o.d -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlreactformat.cpp [ 83%] Built target smileyformat /usr/bin/gmake -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend [ 83%] Linking CXX shared module ../lib64/plugin_charges.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -MF CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o.d -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/chemdoodlejsonformat.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Linking CXX shared module ../../lib64/rxnformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlformat.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/math/matrix3x3.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlformat.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/pubchem.cpp:17: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/rxnformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Built target rxnformat [ 83%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xmlformat.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o -MF CMakeFiles/xmlformat.dir/xml/xml.cpp.o.d -o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/plugin_charges.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 83%] Built target plugin_charges [ 84%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -MF CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlreactformat.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/chemdoodlejsonformat.cpp:20: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_tree.h:67, from /usr/include/c++/15/map:64, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/chemdoodlejsonformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/cmlreactformat.cpp:15: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Linking CXX shared module ../../lib64/wlnformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/wlnformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -MF CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o.d -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/pubchemjsonformat.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/wlnformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/wlnformat.so CMakeFiles/wlnformat.dir/wlnformat.cpp.o "CMakeFiles/wlnformat.dir/wln-nextmove.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Built target wlnformat /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend [ 84%] Linking CXX shared module ../../lib64/pdbqtformat.so gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obabel.dir/DependInfo.cmake "--color=" cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obabel.dir/obabel.cpp.o -MF CMakeFiles/obabel.dir/obabel.cpp.o.d -o CMakeFiles/obabel.dir/obabel.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obabel.cpp [ 84%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o [ 84%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpng2format_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -MF CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o.d -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/depict/cairopainter.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dpubchem_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o -MF CMakeFiles/pubchem.dir/xml/xml.cpp.o.d -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp [ 84%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o [ 84%] Linking CXX shared module ../../lib64/rinchiformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rinchiformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/g++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -MF CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o.d -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pdbqtformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Built target pdbqtformat /usr/bin/gmake -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obconformer.dir/DependInfo.cmake "--color=" /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obenergy.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 84%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obconformer.dir/obconformer.cpp.o -MF CMakeFiles/obconformer.dir/obconformer.cpp.o.d -o CMakeFiles/obconformer.dir/obconformer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obconformer.cpp gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 85%] Linking CXX shared module ../../lib64/rsmiformat.so [ 85%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obenergy.dir/obenergy.cpp.o -MF CMakeFiles/obenergy.dir/obenergy.cpp.o.d -o CMakeFiles/obenergy.dir/obenergy.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obenergy.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/rinchiformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/rinchiformat.so CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 85%] Built target rinchiformat /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obfit.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 85%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obfit.dir/obfit.cpp.o -MF CMakeFiles/obfit.dir/obfit.cpp.o.d -o CMakeFiles/obfit.dir/obfit.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfit.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/rsmiformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 85%] Built target rsmiformat /usr/bin/gmake -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obfitall.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 86%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obfitall.dir/obfitall.cpp.o -MF CMakeFiles/obfitall.dir/obfitall.cpp.o.d -o CMakeFiles/obfitall.dir/obfitall.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfitall.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obabel.cpp:43: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obabel.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obmolecformat.h:36, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/pubchemjsonformat.cpp:21: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_tree.h:67, from /usr/include/c++/15/map:64, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/json/pubchemjsonformat.cpp:17: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/xml.h:21, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/formats/xml/xml.cpp:15: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:24: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:28, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obconformer.cpp:25: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/forcefield.h:22: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 87%] Linking CXX shared module ../../lib64/xmlformat.so In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obenergy.cpp:28: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obenergy.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfit.cpp:37: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfit.cpp:35: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 87%] Linking CXX shared module ../../lib64/png2format.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/xmlformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 87%] Built target xmlformat /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obgen.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 87%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/png2format.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/png2format.so CMakeFiles/png2format.dir/png2format.cpp.o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 87%] Built target png2format /usr/bin/gmake -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfitall.cpp:40: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obminimize.dir/DependInfo.cmake "--color=" In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obfitall.cpp:35: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obmm.dir/build.make 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../bin/obabel cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obminimize.dir/obminimize.cpp.o -MF CMakeFiles/obminimize.dir/obminimize.cpp.o.d -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obminimize.cpp gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 /usr/bin/gmake -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Building CXX object tools/CMakeFiles/obmm.dir/obmm.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obmm.dir/obmm.cpp.o -MF CMakeFiles/obmm.dir/obmm.cpp.o.d -o CMakeFiles/obmm.dir/obmm.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obmm.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obabel.dir/link.d CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Built target obabel /usr/bin/gmake -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend [ 88%] Linking CXX executable ../bin/obenergy gmake[2]: Entering 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gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obprobe.dir/obprobe.cpp.o -MF CMakeFiles/obprobe.dir/obprobe.cpp.o.d -o CMakeFiles/obprobe.dir/obprobe.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprobe.cpp [ 88%] Linking CXX shared module ../../lib64/pubchem.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obprop.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Linking CXX shared module ../../lib64/cdxmlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 [ 88%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obprop.dir/obprop.cpp.o -MF CMakeFiles/obprop.dir/obprop.cpp.o.d -o CMakeFiles/obprop.dir/obprop.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprop.cpp In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgen.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgen.cpp:30: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pubchem.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 88%] Linking CXX executable ../bin/obconformer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 [ 88%] Built target pubchem /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 89%] Linking CXX shared module ../../lib64/chemdrawcdx.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 [ 89%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o -MF CMakeFiles/obrotamer.dir/obrotamer.cpp.o.d -o CMakeFiles/obrotamer.dir/obrotamer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotamer.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cdxmlformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 89%] Built target cdxmlformat /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obrotate.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 89%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obrotate.dir/obrotate.cpp.o -MF CMakeFiles/obrotate.dir/obrotate.cpp.o.d -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotate.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obconformer.dir/link.d CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obminimize.cpp:28: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obminimize.cpp:26: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 89%] Built target obconformer /usr/bin/gmake -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obsym.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 90%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obsym.dir/obsym.cpp.o -MF CMakeFiles/obsym.dir/obsym.cpp.o.d -o CMakeFiles/obsym.dir/obsym.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obsym.cpp /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdrawcdx.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 90%] Built target chemdrawcdx /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 90%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obmm.cpp:58: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obmm.cpp:54: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o -MF CMakeFiles/obtautomer.dir/obtautomer.cpp.o.d -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obtautomer.cpp [ 90%] Linking CXX executable ../bin/obfit cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/descriptor.h:27, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprop.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprop.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Linking CXX executable ../bin/obfitall cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obfit.dir/link.d CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 90%] Built target obfit /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obthermo.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 91%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obthermo.dir/obthermo.cpp.o -MF CMakeFiles/obthermo.dir/obthermo.cpp.o.d -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obthermo.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obfitall.dir/link.d CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprobe.cpp:32: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obprobe.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotamer.cpp:26: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotamer.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 91%] Built target obfitall /usr/bin/gmake -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 91%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o -MF CMakeFiles/obdistgen.dir/obdistgen.cpp.o.d -o CMakeFiles/obdistgen.dir/obdistgen.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obdistgen.cpp [ 91%] Linking CXX executable ../bin/obgen cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obsym.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obsym.cpp:28: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obtautomer.cpp:26: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obtautomer.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../bin/obminimize cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotate.cpp:43: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrotate.cpp:38: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obgen.dir/link.d CMakeFiles/obgen.dir/obgen.cpp.o -o ../bin/obgen -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 91%] Built target obgen /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obgrep.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obgrep.dir/obgrep.cpp.o -MF CMakeFiles/obgrep.dir/obgrep.cpp.o.d -o CMakeFiles/obgrep.dir/obgrep.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgrep.cpp /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obminimize.dir/link.d CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Built target obminimize /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -MF CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o.d -o CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obspectrophore.cpp [ 92%] Linking CXX executable ../bin/obsym cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obthermo.cpp:27: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obthermo.cpp:25: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Linking CXX shared module ../../lib64/cmlreactformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obsym.dir/link.d CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Built target obsym /usr/bin/gmake -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools/CMakeFiles/obrms.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 92%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT tools/CMakeFiles/obrms.dir/obrms.cpp.o -MF CMakeFiles/obrms.dir/obrms.cpp.o.d -o CMakeFiles/obrms.dir/obrms.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrms.cpp [ 92%] Linking CXX executable ../bin/obtautomer cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 [ 93%] Linking CXX executable ../bin/obmm cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cmlreactformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obtautomer.dir/link.d CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz [ 93%] Built target cmlreactformat /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obdistgen.cpp:29: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/base.h:25, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obdistgen.cpp:27: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake "--color=" [ 93%] Built target obtautomer /usr/bin/gmake -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 94%] Linking CXX executable ../bin/obprop cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build [ 94%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o -MF CMakeFiles/obgui.dir/OBGUI.cpp.o.d -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp [ 94%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbindings_python_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/python3.13 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -MF CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o.d -o CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp In file included from /usr/include/python3.13/pyconfig.h:6, from /usr/include/python3.13/Python.h:14, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:177: /usr/include/python3.13/pyconfig-64.h:1943:9: warning: '_LARGEFILE_SOURCE' redefined 1943 | #define _LARGEFILE_SOURCE 1 | ^~~~~~~~~~~~~~~~~ : note: this is the location of the previous definition /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obmm.dir/link.d CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 94%] Built target obmm /usr/bin/gmake -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 94%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ 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'/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgrep.cpp:28: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obgrep.cpp:27: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Built target obprop /usr/bin/gmake -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/depend gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/gmake -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/build gmake[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 95%] Building CXX object scripts/CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -Dbindings_ruby_EXPORTS -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/usr/include/python3.13 -I/usr/lib64/perl5/CORE -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIC -MD -MT scripts/CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o -MF CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o.d -o CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp [ 95%] Linking CXX executable ../bin/obprobe cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 [ 95%] Linking CXX executable ../bin/obthermo cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obspectrophore.cpp:10: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/bits/ostream.h:43, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obspectrophore.cpp:1: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obprobe.dir/link.d CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe 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-I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 -fPIE -MD -MT src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o -MF CMakeFiles/obgui.dir/stdwx.cpp.o.d -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/stdwx.cpp cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/g++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE="" -D__WXGTK__ -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/data -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include -I/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/. -isystem /usr/lib64/wx/include -isystem /usr/lib64/wx/include/gtk3-unicode-3.2 -isystem /usr/include/wx-3.2 -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -std=gnu++11 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/refwrap.h:41, from /usr/include/c++/15/vector:70, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/mol.h:44, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/tools/obrms.cpp:31: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obrotate.dir/link.d CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemkinformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target obrotate /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obrotamer.dir/link.d CMakeFiles/obrotamer.dir/obrotamer.cpp.o -o ../bin/obrotamer -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target chemkinformat [ 98%] Built target obrotamer [ 98%] Linking CXX executable ../bin/obgrep cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'void SWIG_RubyInitializeTrackings()': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:1263:29: warning: 'void ruby::backward::cxxanyargs::rb_define_virtual_variable(const char*, VALUE (*)(...), void (*)(VALUE, ID, VALUE*))' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 1263 | rb_define_virtual_variable("SWIG_TRACKINGS_COUNT", swig_ruby_trackings_count, (rb_gvar_setter_t *)NULL); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ruby/internal/anyargs.h:83, from /usr/include/ruby/ruby.h:27, from /usr/include/ruby.h:38, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:879: /usr/include/ruby/backward/cxxanyargs.hpp:90:1: note: declared here 90 | rb_define_virtual_variable(const char *q, type *w, rb_gvar_setter_t *e) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'void SWIG_RubyIterateTrackings(void (*)(void*, VALUE))': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:1317:13: warning: 'int ruby::backward::cxxanyargs::rb_st_foreach(st_table*, int (*)(...), st_data_t)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 1317 | st_foreach(swig_ruby_trackings, (int (*)(ANYARGS))&swig_ruby_internal_iterate_callback, (st_data_t)meth); | ^ In file included from /usr/include/ruby/internal/intern/hash.h:26, from /usr/include/ruby/backward/cxxanyargs.hpp:16: /usr/include/ruby/backward/cxxanyargs.hpp:432:1: note: declared here 432 | st_foreach(st_table *q, int_type *w, st_data_t e) | ^~~~~~~~~~ /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obgrep.dir/link.d CMakeFiles/obgrep.dir/obgrep.cpp.o -o ../bin/obgrep -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target obgrep [ 98%] Linking CXX executable ../bin/obdistgen cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obdistgen.dir/link.d CMakeFiles/obdistgen.dir/obdistgen.cpp.o -o ../bin/obdistgen -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target obdistgen In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:3416: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/stdexcept:41, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:3317: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2114: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h: At global scope: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/stdexcept:41, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2084: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Linking CXX executable ../bin/obrms cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 [ 98%] Linking CXX executable ../bin/obspectrophore cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 [ 98%] Linking CXX shared module ../../lib64/chemdoodlejsonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In member function 'bool swig::GC_VALUE::relational_equal_op(const swig::GC_VALUE&, const ID&, bool (*)(const VALUE&, const VALUE&)) const': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2321:24: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2321 | ret = rb_rescue(RUBY_METHOD_FUNC(swig_rescue_funcall), VALUE(&args), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2322 | (RUBY_METHOD_FUNC(swig_rescue_swallow)), Qnil); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In member function 'swig::GC_VALUE swig::GC_VALUE::unary_op(const ID&) const': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2361:22: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2361 | ret = rb_rescue(RUBY_METHOD_FUNC(swig_rescue_funcall), VALUE(&args), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2362 | (RUBY_METHOD_FUNC(swig_rescue_swallow)), Qnil); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In member function 'swig::GC_VALUE swig::GC_VALUE::binary_op(const swig::GC_VALUE&, const ID&) const': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2380:22: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2380 | ret = rb_rescue(RUBY_METHOD_FUNC(swig_rescue_funcall), VALUE(&args), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2381 | (RUBY_METHOD_FUNC(swig_rescue_swallow)), Qnil); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'int SWIG_AsVal_unsigned_SS_long(VALUE, long unsigned int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2731:18: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2731 | if (rb_rescue(RUBY_METHOD_FUNC(SWIG_AUX_NUM2ULONG), (VALUE)a, RUBY_METHOD_FUNC(SWIG_ruby_failed), 0) != Qnil) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'int SWIG_AsVal_unsigned_SS_long_SS_long(VALUE, long long unsigned int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2776:18: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2776 | if (rb_rescue(RUBY_METHOD_FUNC(SWIG_AUX_NUM2ULL), (VALUE)a, RUBY_METHOD_FUNC(SWIG_ruby_failed), 0) != Qnil) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'int SWIG_AsVal_long(VALUE, long int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2834:18: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2834 | if (rb_rescue(RUBY_METHOD_FUNC(SWIG_AUX_NUM2LONG), (VALUE)a, RUBY_METHOD_FUNC(SWIG_ruby_failed), 0) != Qnil) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'int SWIG_AsVal_long_SS_long(VALUE, long long int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:2864:18: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 2864 | if (rb_rescue(RUBY_METHOD_FUNC(SWIG_AUX_NUM2LL), (VALUE)a, RUBY_METHOD_FUNC(SWIG_ruby_failed), 0) != Qnil) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obrms.dir/link.d CMakeFiles/obrms.dir/obrms.cpp.o -o ../bin/obrms -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target obrms /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obspectrophore.dir/link.d CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'int SWIG_AsVal_double(VALUE, double*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:5356:18: warning: 'VALUE ruby::backward::cxxanyargs::rb_rescue(VALUE (*)(...), VALUE, VALUE (*)(...), VALUE)' is deprecated: Use of ANYARGS in this function is deprecated [-Wdeprecated-declarations] 5356 | if (rb_rescue(RUBY_METHOD_FUNC(SWIG_AUX_NUM2DBL), (VALUE)a, RUBY_METHOD_FUNC(SWIG_ruby_failed), 0) != Qnil) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:260:1: note: declared here 260 | rb_rescue(type *q, VALUE w, type *e, VALUE r) | ^~~~~~~~~ [ 98%] Built target obspectrophore /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/chemdoodlejsonformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target chemdoodlejsonformat In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:1775: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/stdexcept:41, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:1734: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp:23: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/wx-3.2/wx/stringimpl.h:66, from /usr/include/wx-3.2/wx/unichar.h:15, from /usr/include/wx-3.2/wx/strvararg.h:19, from /usr/include/wx-3.2/wx/string.h:37, from /usr/include/wx-3.2/wx/memory.h:15, from /usr/include/wx-3.2/wx/object.h:19, from /usr/include/wx-3.2/wx/tokenzr.h:14, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/./stdwx.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp:20: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'VALUE _wrap_new_Dummy(int, VALUE*, VALUE)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:21627:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21627 | std::binary_function< char const *,char const *,bool > *result = 0 ; if ((argc < 0) || (argc > 0)) { | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:21629:18: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21629 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:21629:79: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21629 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'void free_std_binary_function_Sl_char_SS_const_Sm__Sc_char_SS_const_Sm__Sc_bool_Sg_(void*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:21633:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21633 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *)self; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:21633:74: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21633 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *)self; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Linking CXX shared module ../../lib64/cmlformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::OnConvert(wxCommandEvent&)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/OBGUI.cpp:589:9: warning: ignoring return value of 'std::__cxx11::basic_istringstream<_CharT, _Traits, _Alloc>::__string_type std::__cxx11::basic_istringstream<_CharT, _Traits, _Alloc>::str() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator; __string_type = std::__cxx11::basic_string]', declared with attribute 'nodiscard' [-Wunused-result] 589 | ss.str(); | ~~~~~~^~ In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:28: /usr/include/c++/15/sstream:713:7: note: declared here 713 | str() const _GLIBCXX_LVAL_REF_QUAL | ^~~ /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/cmlformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 98%] Built target cmlformat In file included from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/format.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/obconversion.h:37, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/./optswx.h:22, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/optswx.cpp:22: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/include/openbabel/plugin.h:41:42: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct OBERROR CharPtrLess : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/wx-3.2/wx/stringimpl.h:66, from /usr/include/wx-3.2/wx/unichar.h:15, from /usr/include/wx-3.2/wx/strvararg.h:19, from /usr/include/wx-3.2/wx/string.h:37, from /usr/include/wx-3.2/wx/memory.h:15, from /usr/include/wx-3.2/wx/object.h:19, from /usr/include/wx-3.2/wx/tokenzr.h:14, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/./stdwx.h:24, from /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/src/GUI/optswx.cpp:19: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp: In function 'void _wrap_new_Dummy(PerlInterpreter*, CV*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11000:45: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11000 | XS(_wrap_new_Dummy) { { int argvi = 0; std::binary_function< char const *,char const *,bool > *result = 0 ; dXSARGS; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11002:20: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11002 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11002:81: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11002 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp: In function 'void _wrap_delete_Dummy(PerlInterpreter*, CV*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11006:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11006 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *) 0 ; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11006:74: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11006 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *) 0 ; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:11012:36: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 11012 | arg1 = reinterpret_cast< std::binary_function< char const *,char const *,bool > * >(argp1); delete arg1; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp: In function 'PyObject* _wrap_new_dummy(PyObject*, PyObject*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21928:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21928 | std::binary_function< char const *,char const *,bool > *result = 0 ; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21930:18: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21930 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21930:79: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21930 | result = (std::binary_function< char const *,char const *,bool > *)new std::binary_function< char const *,char const *,bool >(); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp: In function 'PyObject* _wrap_delete_dummy(PyObject*, PyObject*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21934:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21934 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *) 0 ; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21934:72: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21934 | std::binary_function< char const *,char const *,bool > *arg1 = (std::binary_function< char const *,char const *,bool > *) 0 ; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:21939:34: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 21939 | arg1 = reinterpret_cast< std::binary_function< char const *,char const *,bool > * >(argp1); delete arg1; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 99%] Linking CXX shared module ../../lib64/pubchemjsonformat.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/pubchemjsonformat.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../../lib64/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lmaeparser -lcoordgen -lm -ldl -lz -lcairo -linchi -lm ../../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 99%] Built target pubchemjsonformat /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp: In function 'void* _p_OpenBabel__CharPtrLessTo_p_std__binary_functionT_char_const_p_char_const_p_bool_t(void*, int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/python/openbabel/openbabel-python.cpp:46983:27: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 46983 | return (void *)((std::binary_function< char const *,char const *,bool > *) ((OpenBabel::CharPtrLess *) x)); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp: In function 'void* _p_OpenBabel__CharPtrLessTo_p_std__binary_functionT_char_const_p_char_const_p_bool_t(void*, int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/ruby/openbabel-ruby.cpp:53223:27: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 53223 | return (void *)((std::binary_function< char const *,char const *,bool > *) ((OpenBabel::CharPtrLess *) x)); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp: In function 'void* _p_OpenBabel__CharPtrLessTo_p_std__binary_functionT_char_const_p_char_const_p_bool_t(void*, int*)': /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/scripts/perl/openbabel-perl.cpp:41097:27: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41097 | return (void *)((std::binary_function< char const *,char const *,bool > *) ((OpenBabel::CharPtrLess *) x)); | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 99%] Linking CXX executable ../../bin/obgui cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic -Wl,--dependency-file=CMakeFiles/obgui.dir/link.d CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: ../../lib64/libopenbabel.so.7.0.0 -L/usr/lib64 -pthread -lwx_baseu-3.2 -lwx_gtk3u_core-3.2 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [ 99%] Built target obgui [ 99%] Linking CXX shared module ../lib64/_openbabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_python.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/_openbabel.so "CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lpython3.13 ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_python [100%] Linking CXX shared module ../lib64/openbabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_ruby.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_ruby.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/openbabel.so "CMakeFiles/bindings_ruby.dir/ruby/openbabel-ruby.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lruby ../lib64/libopenbabel.so.7.0.0 -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_ruby [100%] Linking CXX shared module ../lib64/OpenBabel.so cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_perl.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -pthread -fpermissive -DNDEBUG -O2 -g -Wl,--dependency-file=CMakeFiles/bindings_perl.dir/link.d -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib64/OpenBabel.so "CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o" -Wl,-rpath,/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/lib64: -lperl ../lib64/libopenbabel.so.7.0.0 -lpthread -ldl -lm -lcrypt -lutil -lc -lmaeparser -lcoordgen -lm -ldl -lz gmake[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' [100%] Built target bindings_perl gmake[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build' /usr/bin/cmake -E cmake_progress_start /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/build/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.ZHHHWi + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + '[' 1 -eq 1 ']' + '[' /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT '!=' / ']' + rm -rf /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT ++ dirname /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + mkdir -p /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + mkdir /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd openbabel-3.1.1 + '[' 1 -eq 1 ']' + touch scripts/CMakeLists.txt + DESTDIR=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT + /usr/bin/cmake --install build -- Install configuration: "RelWithDebInfo" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/babelconfig.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/pkgconfig/openbabel-3.pc -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3_EXPORTS.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3_EXPORTS-relwithdebinfo.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3Config.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/cmake/openbabel3/OpenBabel3ConfigVersion.cmake -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/chemdrawcdx.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/alias.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/atom.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/base.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/bitvec.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/bond.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/bondtyper.h -- Installing: 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/patty.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/phmodel.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/plugin.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/pointgroup.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/query.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/reaction.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/reactionfacade.h -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/include/openbabel3/openbabel/residue.h -- Installing: 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"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pwscfformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/qchemformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/qchemformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/siestaformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/siestaformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/turbomoleformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/turbomoleformat.so" to "" -- Installing: 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-- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/bgfformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/boxformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/boxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacaoformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacaoformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacheformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cacheformat.so" to "" -- Installing: 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"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdrawct.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemtoolformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemtoolformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cifformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cifformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cofformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cofformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/crkformat.so 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"/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fhformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fingerprintformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fingerprintformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fpsformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/fpsformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/freefracformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/freefracformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/ghemicalformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/ghemicalformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/gromos96format.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/gromos96format.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/groformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/groformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lmpdatformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lmpdatformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lpmdformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/lpmdformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mdffformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mdffformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmcifformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmcifformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/mmodformat.so 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/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msmsformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/msmsformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/opendxformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/opendxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/outformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/outformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pcmodelformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pcmodelformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pdbqtformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pdbqtformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pointcloudformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pointcloudformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/posformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/posformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pqrformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pqrformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/shelxformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/shelxformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/smileyformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/smileyformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/stlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/stlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/thermoformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/thermoformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/tinkerformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/tinkerformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/unichemformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/unichemformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/viewmolformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/viewmolformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/wlnformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/wlnformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xedformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xedformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xyzformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xyzformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/yasaraformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/yasaraformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rxnformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rxnformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdrawcdx.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdrawcdx.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemkinformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemkinformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rinchiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rinchiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rsmiformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/rsmiformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/png2format.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/png2format.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cdxmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cdxmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchem.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchem.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xmlformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/xmlformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlreactformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/cmlreactformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdoodlejsonformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/chemdoodlejsonformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchemjsonformat.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/openbabel/pubchemjsonformat.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obabel -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obabel" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obconformer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obconformer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obenergy -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obenergy" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfit -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfit" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfitall -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obfitall" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgen -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgen" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obminimize -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obminimize" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obmm -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obmm" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprobe -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprobe" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprop -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obprop" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotamer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotamer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotate -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrotate" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obsym -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obsym" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obtautomer -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obtautomer" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obthermo -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obthermo" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obdistgen -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obdistgen" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgrep -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgrep" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obspectrophore -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obspectrophore" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrms -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obrms" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgui -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/bin/obgui" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/_openbabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/_openbabel.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/__init__.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/openbabel.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/openbabel/pybel.py -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so" to "" -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/Chemistry/OpenBabel.pm -- Installing: /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/ruby/vendor_ruby/openbabel.so -- Set non-toolchain portion of runtime path of "/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/ruby/vendor_ruby/openbabel.so" to "" + chmod 0755 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so + desktop-file-install --dir=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/applications /home/pterjan/rpmbuild/SOURCES/openbabelgui.desktop + install -Dpm644 babel.png /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/icons/hicolor/32x32/apps/babel.png + /usr/bin/find-debuginfo -j16 --strict-build-id -m -i --build-id-seed 3.1.1-19.mga10 --unique-debug-suffix -3.1.1-19.mga10.x86_64 --unique-debug-src-base openbabel-3.1.1-19.mga10.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1 find-debuginfo: starting Extracting debug info from 151 files DWARF-compressing 151 files sepdebugcrcfix: Updated 151 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/openbabel-3.1.1-19.mga10.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + '[' -n '' ']' + /usr/share/spec-helper/clean_files + '[' -n '' ']' + /usr/share/spec-helper/compress_files .xz + '[' -n '' ']' + /usr/share/spec-helper/relink_symlinks + '[' -n '' ']' + /usr/share/spec-helper/clean_perl + '[' -n '' ']' + /usr/share/spec-helper/lib_symlinks + '[' -n '' ']' + /usr/share/spec-helper/gprintify + '[' -n '' ']' + /usr/share/spec-helper/fix_mo + '[' -n '' ']' + /usr/share/spec-helper/fix_pamd + '[' -n '' ']' + /usr/share/spec-helper/remove_info_dir + '[' -n '' ']' + /usr/share/spec-helper/fix_eol + '[' -n '' ']' + /usr/share/spec-helper/check_desktop_files /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/applications/openbabelgui.desktop: hint: value "Education;Science;Chemistry;Physics;Biology;" for key "Categories" in group "Desktop Entry" contains more than one main category; application might appear more than once in the application menu + '[' -n '' ']' + /usr/share/spec-helper/check_elf_files + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-mangle-shebangs + env -u SOURCE_DATE_EPOCH /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j16 Bytecompiling .py files below /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Not clamping source mtimes, $SOURCE_DATE_EPOCH not set Bytecompiling .py files below /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Not clamping source mtimes, $SOURCE_DATE_EPOCH not set + /usr/lib/rpm/redhat/brp-python-hardlink Reading /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/SPECPARTS/rpm-debuginfo.specpart Processing files: openbabel-3.1.1-19.mga10.x86_64 Executing(%doc): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.Q83ISF + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + cd openbabel-3.1.1 + DOCDIR=/home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/AUTHORS /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/COPYING /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/README.md /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/THANKS /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/FAQ.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/OBTwoMigration.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/OpenBabelGUI.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/api-footer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/api-header.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obabel.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obchiral.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obconformer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obenergy.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obfit.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgen.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgrep.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obgui.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obminimize.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obprobe.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obprop.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obrotamer.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obrotate.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/obspectrophore.html /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.inc /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.mol2 /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.png /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/dioxin.pov /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/README.dioxin.pov /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + cp -pr /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/openbabel-3.1.1/doc/README.povray /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT/usr/share/doc/openbabel + RPM_EC=0 ++ jobs -p + exit 0 Provides: application() application(openbabelgui.desktop) openbabel = 3.1.1-19.mga10 openbabel(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcairo.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libinchi.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmaeparser.so.1()(64bit) libopenbabel.so.7()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libwx_baseu-3.2.so.0()(64bit) libwx_baseu-3.2.so.0(WXU_3.2)(64bit) libwx_gtk3u_core-3.2.so.0()(64bit) libwx_gtk3u_core-3.2.so.0(WXU_3.2)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.5.0)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.5)(64bit) libz.so.1()(64bit) Processing files: lib64openbabel7-3.1.1-19.mga10.x86_64 Provides: lib64openbabel7 = 3.1.1-19.mga10 lib64openbabel7(x86-64) = 3.1.1-19.mga10 libopenbabel.so.7()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.7)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libz.so.1()(64bit) Processing files: lib64openbabel-devel-3.1.1-19.mga10.x86_64 Provides: cmake(OpenBabel3) = 3.1.0 cmake(openbabel3) = 3.1.0 devel(libopenbabel(64bit)) lib64openbabel-devel = 3.1.1-19.mga10 lib64openbabel-devel(x86-64) = 3.1.1-19.mga10 openbabel-devel = 3.1.1-19.mga10 pkgconfig(openbabel-3) = 3.1.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: devel(libgcc_s(64bit)) devel(libm(64bit)) devel(libstdc++(64bit)) devel(libz(64bit)) pkgconfig Processing files: perl-openbabel-3.1.1-19.mga10.x86_64 Provides: perl(Chemistry::OpenBabel) perl(Chemistry::OpenBabel::AliasData) perl(Chemistry::OpenBabel::CharPtrLess) perl(Chemistry::OpenBabel::Dummy) perl(Chemistry::OpenBabel::LineSearchType) perl(Chemistry::OpenBabel::OBAngle) perl(Chemistry::OpenBabel::OBAngleData) perl(Chemistry::OpenBabel::OBAtom) perl(Chemistry::OpenBabel::OBAtomAtomIter) perl(Chemistry::OpenBabel::OBAtomBondIter) perl(Chemistry::OpenBabel::OBAtomHOF) perl(Chemistry::OpenBabel::OBAtomicHeatOfFormationTable) perl(Chemistry::OpenBabel::OBBase) perl(Chemistry::OpenBabel::OBBitVec) perl(Chemistry::OpenBabel::OBBond) perl(Chemistry::OpenBabel::OBBuilder) perl(Chemistry::OpenBabel::OBCommentData) perl(Chemistry::OpenBabel::OBConformerData) perl(Chemistry::OpenBabel::OBConversion) perl(Chemistry::OpenBabel::OBDOSData) perl(Chemistry::OpenBabel::OBDescriptor) perl(Chemistry::OpenBabel::OBElectronicTransitionData) perl(Chemistry::OpenBabel::OBError) perl(Chemistry::OpenBabel::OBExternalBond) perl(Chemistry::OpenBabel::OBExternalBondData) perl(Chemistry::OpenBabel::OBFFCalculation2) perl(Chemistry::OpenBabel::OBFFCalculation3) perl(Chemistry::OpenBabel::OBFFCalculation4) perl(Chemistry::OpenBabel::OBFFConstraint) perl(Chemistry::OpenBabel::OBFFConstraints) perl(Chemistry::OpenBabel::OBFFParameter) perl(Chemistry::OpenBabel::OBFingerprintIter) perl(Chemistry::OpenBabel::OBForceField) perl(Chemistry::OpenBabel::OBFormat) perl(Chemistry::OpenBabel::OBFreeGrid) perl(Chemistry::OpenBabel::OBFreeGridPoint) perl(Chemistry::OpenBabel::OBGenericData) perl(Chemistry::OpenBabel::OBGlobalDataBase) perl(Chemistry::OpenBabel::OBGridData) perl(Chemistry::OpenBabel::OBInternalCoord) perl(Chemistry::OpenBabel::OBMatrixData) perl(Chemistry::OpenBabel::OBMessageHandler) perl(Chemistry::OpenBabel::OBMol) perl(Chemistry::OpenBabel::OBMolAngleIter) perl(Chemistry::OpenBabel::OBMolAtomBFSIter) perl(Chemistry::OpenBabel::OBMolAtomDFSIter) perl(Chemistry::OpenBabel::OBMolAtomIter) perl(Chemistry::OpenBabel::OBMolBondBFSIter) perl(Chemistry::OpenBabel::OBMolBondIter) perl(Chemistry::OpenBabel::OBMolPairIter) perl(Chemistry::OpenBabel::OBMolRingIter) perl(Chemistry::OpenBabel::OBMolTorsionIter) perl(Chemistry::OpenBabel::OBOp) perl(Chemistry::OpenBabel::OBOrbital) perl(Chemistry::OpenBabel::OBOrbitalData) perl(Chemistry::OpenBabel::OBPairData) perl(Chemistry::OpenBabel::OBPcharge) perl(Chemistry::OpenBabel::OBPlugin) perl(Chemistry::OpenBabel::OBRTree) perl(Chemistry::OpenBabel::OBResidue) perl(Chemistry::OpenBabel::OBResidueAtomIter) perl(Chemistry::OpenBabel::OBResidueData) perl(Chemistry::OpenBabel::OBResidueIter) perl(Chemistry::OpenBabel::OBRing) perl(Chemistry::OpenBabel::OBRingData) perl(Chemistry::OpenBabel::OBRingSearch) perl(Chemistry::OpenBabel::OBRotamerList) perl(Chemistry::OpenBabel::OBRotationData) perl(Chemistry::OpenBabel::OBRotor) perl(Chemistry::OpenBabel::OBRotorKeys) perl(Chemistry::OpenBabel::OBRotorList) perl(Chemistry::OpenBabel::OBRotorRule) perl(Chemistry::OpenBabel::OBRotorRules) perl(Chemistry::OpenBabel::OBSSMatch) perl(Chemistry::OpenBabel::OBSerialNums) perl(Chemistry::OpenBabel::OBSetData) perl(Chemistry::OpenBabel::OBSmartsMatcher) perl(Chemistry::OpenBabel::OBSmartsPattern) perl(Chemistry::OpenBabel::OBSqrtTbl) perl(Chemistry::OpenBabel::OBStopwatch) perl(Chemistry::OpenBabel::OBSymmetryData) perl(Chemistry::OpenBabel::OBTorsion) perl(Chemistry::OpenBabel::OBTorsionData) perl(Chemistry::OpenBabel::OBTypeTable) perl(Chemistry::OpenBabel::OBUnitCell) perl(Chemistry::OpenBabel::OBVectorData) perl(Chemistry::OpenBabel::OBVibrationData) perl(Chemistry::OpenBabel::OBVirtualBond) perl(Chemistry::OpenBabel::VectorDouble) perl(Chemistry::OpenBabel::VectorInt) perl(Chemistry::OpenBabel::VectorOBBond) perl(Chemistry::OpenBabel::VectorOBMol) perl(Chemistry::OpenBabel::VectorOBResidue) perl(Chemistry::OpenBabel::VectorOBRing) perl(Chemistry::OpenBabel::VectorString) perl(Chemistry::OpenBabel::VectorUnsignedInt) perl(Chemistry::OpenBabel::VectorVInt) perl(Chemistry::OpenBabel::VectorVector3) perl(Chemistry::OpenBabel::VectorpOBGenericData) perl(Chemistry::OpenBabel::VectorpOBRing) perl(Chemistry::OpenBabel::_OBAtomAtomIter) perl(Chemistry::OpenBabel::_OBAtomBondIter) perl(Chemistry::OpenBabel::_OBMolAngleIter) perl(Chemistry::OpenBabel::_OBMolAtomBFSIter) perl(Chemistry::OpenBabel::_OBMolAtomDFSIter) perl(Chemistry::OpenBabel::_OBMolAtomIter) perl(Chemistry::OpenBabel::_OBMolBondIter) perl(Chemistry::OpenBabel::_OBMolPairIter) perl(Chemistry::OpenBabel::_OBMolRingIter) perl(Chemistry::OpenBabel::_OBMolTorsionIter) perl(Chemistry::OpenBabel::_OBResidueAtomIter) perl(Chemistry::OpenBabel::matrix3x3) perl(Chemistry::OpenBabel::obLogBuf) perl(Chemistry::OpenBabel::rotor_digit) perl(Chemistry::OpenBabel::stringbuf) perl(Chemistry::OpenBabel::vector3) perl(Chemistry::OpenBabelc) perl-openbabel = 3.1.1-19.mga10 perl-openbabel(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libperl.so.5.40()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(vars) perl-base >= 2:5.40.1 Processing files: python3-openbabel-3.1.1-19.mga10.x86_64 Provides: python-openbabel = 3.1.1-19.mga10 python3-openbabel = 3.1.1-19.mga10 python3-openbabel(x86-64) = 3.1.1-19.mga10 python3.13-openbabel = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libpython3.13.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 Obsoletes: python-openbabel < 3.1.1-19.mga10 Processing files: ruby-openbabel-3.1.1-19.mga10.x86_64 Provides: ruby-openbabel = 3.1.1-19.mga10 ruby-openbabel(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libopenbabel.so.7()(64bit) libruby.so.3.4()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: openbabel-debugsource-3.1.1-19.mga10.x86_64 Provides: openbabel-debugsource = 3.1.1-19.mga10 openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: openbabel-debuginfo-3.1.1-19.mga10.x86_64 Provides: debuginfo(build-id) = 03cc0132bcf071b09273440e68f1c3ecf54f3fc5 debuginfo(build-id) = 096f2009816a3f030941e9c24b04a30b3b071b9a debuginfo(build-id) = 0abc5979ef09b5f697d58166a0ae573fbb6ade39 debuginfo(build-id) = 0c50851a8856a2d144d0157fd089002e1b090ea2 debuginfo(build-id) = 0de6c5e93f2c5f0917e11fc99962efddfe361b6b debuginfo(build-id) = 1366bf3f4f517163d753c9b0f61bb55c1805cdc8 debuginfo(build-id) = 18e2a297116b4e7a5f5eaa501e7b25a27d45c02b debuginfo(build-id) = 18eb89827f7c77985418ae9ebe3b0af394e22c34 debuginfo(build-id) = 1911a6b621d979df8690a3941643ff37a9d0811f debuginfo(build-id) = 1a79dafc82c48837ff55525cd9c9b0c4b51f5612 debuginfo(build-id) = 1ad4ecb269e6e196863e805300ab2ba03d538059 debuginfo(build-id) = 1c78e2bbe21c6600765b139c5131c389d6b56851 debuginfo(build-id) = 1ef36720c50d330da2ea5cbfd2d3dbbcc8541179 debuginfo(build-id) = 2294e71e7256fa4eddb615a7d82a20a5c1bd99ec debuginfo(build-id) = 22ea4a2b9aa964ebc5f46219517978ac90f72449 debuginfo(build-id) = 239361630addb50814bed3eb6e3658879efd457b debuginfo(build-id) = 266cd13fd084566b364ee942695a70868d9bfe17 debuginfo(build-id) = 26ead46e861d5390ee65100efa0c25391bff9917 debuginfo(build-id) = 292077f27141b9d607eb4cd79b5836d40ebce46c debuginfo(build-id) = 29e8d42665e9a5aaefbaf619e1501ebaf14ed571 debuginfo(build-id) = 2a72994b16ac7ca4fc1212ad3f8cfa68814f2258 debuginfo(build-id) = 2c384394184b5e3175585e9a6b080061d0f87b0b debuginfo(build-id) = 2db958f0238075ecc86f65079f39ec087f870dda debuginfo(build-id) = 2dd8da9f04d51352e5ae8b32cb9efa2ae51a64d5 debuginfo(build-id) = 2e1e9e6c96014b4cb21120dd0b96a607b32607e3 debuginfo(build-id) = 2ed44a0a134f97fdf83d2a37e56c66f5730d383d debuginfo(build-id) = 2ef0eda25e357fe9bcd1550ca8dbae404cd42dfb debuginfo(build-id) = 2f94ab60a33d7616fb3172fad2f70e93e597f00f debuginfo(build-id) = 304f5f97b6d1d39d66729b8a285ab33aa5b210df debuginfo(build-id) = 318b08eb73c68b37513893ac7357b372ab05848f debuginfo(build-id) = 32f82bb90a21893b974291a08d5746cb6208f757 debuginfo(build-id) = 3380fe2a6dbd1241c71d33bc352bc5e21e85d0ae debuginfo(build-id) = 33bcea8f47a7cbd4456e73c677e6d2179b07550b debuginfo(build-id) = 356a6c412fb21659a8cccc9016e5d4a7ad60d416 debuginfo(build-id) = 35db7ba2aa1f9b929e4c4bacf0721b1f3b447793 debuginfo(build-id) = 361aa7cae283ee4d4f264246e7e3e6f8a73e89c5 debuginfo(build-id) = 387ae37716eb6e9b629b0cb70f149a4bdcde8f12 debuginfo(build-id) = 3ae8fe5104a7aebec1179dea261b7e7cc05db4ba debuginfo(build-id) = 3d0ca80e0e6519ceedf8de42574c152f9f2c1ece debuginfo(build-id) = 3d516fbc5af23bf09140825a2321545b10cf21cb debuginfo(build-id) = 3d959343cb916d74ac75baaa5c7a7da328d32e2b debuginfo(build-id) = 3e92accba8fd78b3f94a7b503979d495cda5e761 debuginfo(build-id) = 3f6279e92654fc033f95a1e25a27e3aef75b50cf debuginfo(build-id) = 406949e8a5dd0224786b8b57b16aecd82958428b debuginfo(build-id) = 423402deb58c1096d48a5bffb076e552e5473ae7 debuginfo(build-id) = 469fe1add3ae51cf8295f3dc56b5bb3614deba48 debuginfo(build-id) = 479454e5771746d236c15689bf766c76acbeaf50 debuginfo(build-id) = 47a7e18eb4f966125bdeed6a472818b91fa689b5 debuginfo(build-id) = 484558c57500a1d91fc417a7b3439b80f1c8d7a0 debuginfo(build-id) = 4a03e3bcf7a9a706bfe6545d0d33ab1ad7274b57 debuginfo(build-id) = 51126fc03dff43fb2a401f3a8c8c35383196e149 debuginfo(build-id) = 5276d48ab9bac57262601c828e9cbc430a02dc9a debuginfo(build-id) = 56b9e73ef44a17cef77611c35295f9fe8f6e8aa2 debuginfo(build-id) = 56c69262fe6b32fb34358184a7c9881d2c2939ec debuginfo(build-id) = 5b020733a693dc2518129cd64788566ea65e2e1d debuginfo(build-id) = 5d20f1f97a5c8cdca3986b89e03250a982e3f01c debuginfo(build-id) = 60612746049ef22511b38fec111950ff8bde2e14 debuginfo(build-id) = 60bf7f09bd01fa1aed6d48f6e732966f7b8dccd9 debuginfo(build-id) = 64277cc2f9e40b39562d32ba2ee252bb43c646d2 debuginfo(build-id) = 650271c976a5efa2730f96dfa13897a053678791 debuginfo(build-id) = 65dfc674a58055ca4114be6cb653ab2a320825a0 debuginfo(build-id) = 66454d4bb22d9fd66bb5f47505f2aef71a4baa0c debuginfo(build-id) = 683db8a9dca0263b6434c1cb1f332b0476c321de debuginfo(build-id) = 6b0290ec319d95d334f6e889c5d75bce3cc782e4 debuginfo(build-id) = 7288f7e608636886abead2cedae23dc7f89f056b debuginfo(build-id) = 73353fd75bc0bfc33f640029361124656d8ce6b8 debuginfo(build-id) = 7a2f97088b4b088857e622b5c024638486488815 debuginfo(build-id) = 7a32e0b646d439243f0391025141d9b7623afeca debuginfo(build-id) = 7b4663e140add88609b7d5f0bc488bca561d6d5e debuginfo(build-id) = 7de15035e857ef6db118e727c1eeafdade2370ce debuginfo(build-id) = 812c9fc894cfb1f866248e3690beef0d444627c3 debuginfo(build-id) = 8210fb9d175bbd53b6011225e0574d62a3b39b44 debuginfo(build-id) = 8235fedcab2a5c6d17059730997071c5214909fd debuginfo(build-id) = 82f3f5c9d0ec6cb013decdd6625ccb8b717ded57 debuginfo(build-id) = 87147d536d558822d21fe5df31626b9482acfdd2 debuginfo(build-id) = 8779638666c437cd036a54d67385986d624cbfea debuginfo(build-id) = 88ceecb8b9347d805afdb8011d6a87698f1db317 debuginfo(build-id) = 8b4a70365a946386d31e700737a8b6d7253ca454 debuginfo(build-id) = 8cb39f9ab36bb2705b118a31ab38897dc2c0af40 debuginfo(build-id) = 8d110f5a9a86facd1e0b07a85044295ac0272b79 debuginfo(build-id) = 8d54de4d4a3cbb2d8bd92e438a8a46a05a85f4b9 debuginfo(build-id) = 8fc148c7067ad4064b5c26d079bc9ad1133d00b5 debuginfo(build-id) = 90dde8a0d3acd3933d6abab49aa2755bc21c4b09 debuginfo(build-id) = 922c94899ae90929e2d07db0b6ad645ec9baaf59 debuginfo(build-id) = 95afcbae6bc0f6c34747dab8c9eed4e4e45bc673 debuginfo(build-id) = 98954b528de99c7b2326e689349f414df27d2a8f debuginfo(build-id) = 999840901b897876b875c9609c5fd6a1c66860c7 debuginfo(build-id) = 9b42972741903fb454c6a10e55fac8b3980a6229 debuginfo(build-id) = 9e029376fe61b2f4fdcf49b997c877c5354763aa debuginfo(build-id) = 9e6bcc58127057f0abde90770d3aff9300d18081 debuginfo(build-id) = a02af38fd3285d47dc7477baf6095a6d2fb96918 debuginfo(build-id) = a076e0359936fda114a83c0e294ea35273e4b500 debuginfo(build-id) = a097419fca1d40bd602f05afc8f15d8ae765e6a2 debuginfo(build-id) = a138df98605e84126a91cb8d918e928319b100dd debuginfo(build-id) = a57853daffcb11a35e99c827fdd9bb5d85ff8100 debuginfo(build-id) = adc9add1c4b12ad3d7bf035bad876be6b7646b3f debuginfo(build-id) = ae495cbbfc8a098a9af38877fcb7853c5f288384 debuginfo(build-id) = af3d9c4f52acf61e0698aafe059875ed94b0ba16 debuginfo(build-id) = afdd221be4bc4f5a573a3cfae7785e39ff054fbe debuginfo(build-id) = b1da9ee4ff22043e7487992a5bef8e7d81df5170 debuginfo(build-id) = b30bc29a9948cdba7f3172463767d00e4cb7ed5c debuginfo(build-id) = b33426d9d727b4388ba5c11fe05850923c72589d debuginfo(build-id) = b776262a33777c902c3bd7699e6099eeae44cb9e debuginfo(build-id) = bb372f7d86f22bce6aa4a624f587f85372f46308 debuginfo(build-id) = bc276fd632ef60ac018e9d71f50f95b41cd98b2b debuginfo(build-id) = bdcb7cf04e0468c58893d917c21e7ce016b5c562 debuginfo(build-id) = c00e9fb649dd858668874cf8d5572e33889b302a debuginfo(build-id) = c132d2d2e061503ec52d5290ee649b52591e9d19 debuginfo(build-id) = c2b61143a5449bbfd832a04901ce4d89edf3d955 debuginfo(build-id) = c34604e4283e3da6a42918365712a220ecbbe999 debuginfo(build-id) = c3f04c4236a75aa234e5a075e6a3aa6a746f0a4e debuginfo(build-id) = c77ef44a01c16fe02a21468c1d85e0865b43a71c debuginfo(build-id) = c814ef7d28a7047e66af9e63c5ed4d183a9a81be debuginfo(build-id) = c88f9ddf574cb4737853787d5221e562757b5e08 debuginfo(build-id) = c89793a177d63a69178fad3774ef656848aff723 debuginfo(build-id) = cae27cc424457b22425b5217162a5c6e80ca81a6 debuginfo(build-id) = cb169e5e8518f6ab537edbe61399e560097de6fc debuginfo(build-id) = cbae7022582033bc3887cb3c2bc207cb92d57508 debuginfo(build-id) = cc6c6dc5cab18c0d3967f05e975413e6eef021ca debuginfo(build-id) = d2114e4c7cd2b19faf0ad96af91d4c88813d0441 debuginfo(build-id) = d2779818d7166a698107916dbc17a0d79833300d debuginfo(build-id) = d2e28845b2a50a7fbcfc87ede1b02cf82624d2fb debuginfo(build-id) = d2f3d92ab7f43e5c044e17f125ca8d511c2dd87d debuginfo(build-id) = d40cb73ae71a678bf39d50f672e23ff829582b91 debuginfo(build-id) = d5236acf9f50cfe188bdf9e013bf446b987898c8 debuginfo(build-id) = d5949b37ad67bf3935cb32c356887416beecc7a4 debuginfo(build-id) = db42b7ba7276b43f7ebbe0d981096189c0f3ce53 debuginfo(build-id) = dc2e27898ee146de48896d5188285f2d541058a2 debuginfo(build-id) = e010cd7f4cd5eebfe52fa9d8e2e6296c0650714c debuginfo(build-id) = e45652b7e335a48b561b8e6e1f0115136da45339 debuginfo(build-id) = e480293d606da9649399099bfaabd8c08053d8c1 debuginfo(build-id) = e744680ca1135c7a1fb63490f5f4549a6b88a894 debuginfo(build-id) = ebbd20a7042f9b969472a6cc2d2be35ae75e548e debuginfo(build-id) = ef7f332b49bb26ae358cef95810a0627a50c2ca3 debuginfo(build-id) = f0d61e8382d846c93de81741d182b0c39dcc3be8 debuginfo(build-id) = f1c45678f483f9c58237d1662711539619d3376b debuginfo(build-id) = f707ae452d7380e3fa1e14d38232ef4dd8ac60e9 debuginfo(build-id) = f78413c1db8f7a4739e42a071b702aca83cbcae9 debuginfo(build-id) = f90f85e04be461afc5228ccecae29b00a82fc9df debuginfo(build-id) = fa4514862dab3d31086dc3ccbc3f010cade05e93 debuginfo(build-id) = fb3321bacfde1915f549d695dc56d858a195fea9 debuginfo(build-id) = fcbbe2d9a981f2d820551715554ac24beb9636ba debuginfo(build-id) = fce4bb7803d6bdf860afcecbb35d301b0ab17a46 debuginfo(build-id) = fdcdc91e3346eed018f001ae7763b7a6da880b09 debuginfo(build-id) = fe8ef50dbc776b0fbb78f818f793b453bd588c90 debuginfo(build-id) = feae80402546bb1580875f483674cd0b907feb02 debuginfo(build-id) = fee801c2aa1b52e7c4d9ebff3be761635cffb7e5 openbabel-debuginfo = 3.1.1-19.mga10 openbabel-debuginfo(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Processing files: lib64openbabel7-debuginfo-3.1.1-19.mga10.x86_64 Provides: debuginfo(build-id) = 3786bd69c4d8d5a9fd0c87dd03b64d8543b97bd5 lib64openbabel7-debuginfo = 3.1.1-19.mga10 lib64openbabel7-debuginfo(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Processing files: perl-openbabel-debuginfo-3.1.1-19.mga10.x86_64 Provides: debuginfo(build-id) = 9fb8321c8f8087fd1c6613ee927a468cff63357f perl-openbabel-debuginfo = 3.1.1-19.mga10 perl-openbabel-debuginfo(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Processing files: python3-openbabel-debuginfo-3.1.1-19.mga10.x86_64 Provides: debuginfo(build-id) = 3cc47e5ad603a869cd0b20a5bdab6a1a592fbf2b python-openbabel-debuginfo = 3.1.1-19.mga10 python3-openbabel-debuginfo = 3.1.1-19.mga10 python3-openbabel-debuginfo(x86-64) = 3.1.1-19.mga10 python3.13-openbabel-debuginfo = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Processing files: ruby-openbabel-debuginfo-3.1.1-19.mga10.x86_64 Provides: debuginfo(build-id) = 7d90d0ac5b32165a1dee4ffcba3f21d477257245 ruby-openbabel-debuginfo = 3.1.1-19.mga10 ruby-openbabel-debuginfo(x86-64) = 3.1.1-19.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: openbabel-debugsource(x86-64) = 3.1.1-19.mga10 Checking for unpackaged file(s): /usr/lib/rpm/check-files /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build/BUILDROOT Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel-devel-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/ruby-openbabel-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel7-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/python3-openbabel-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/perl-openbabel-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/perl-openbabel-debuginfo-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/ruby-openbabel-debuginfo-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/python3-openbabel-debuginfo-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-debugsource-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64openbabel7-debuginfo-3.1.1-19.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/openbabel-debuginfo-3.1.1-19.mga10.x86_64.rpm Executing(rmbuild): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.Ywfesq + umask 022 + cd /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + test -d /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + rm -rf /home/pterjan/rpmbuild/BUILD/openbabel-3.1.1-build + RPM_EC=0 ++ jobs -p + exit 0 D: [iurt_root_command] Success!