D: [iurt_root_command] chroot Building target platforms: x86_64 Building for target x86_64 Installing /home/pterjan/rpmbuild/SRPMS/nco-5.3.3-1.mga10.src.rpm Executing(%mkbuilddir): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.nDY6xS Executing(%prep): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.hw5a6I + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + rm -rf nco-5.3.3 + /usr/lib/rpm/rpmuncompress -x /home/pterjan/rpmbuild/SOURCES/nco-5.3.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd nco-5.3.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /home/pterjan/rpmbuild/SOURCES/nco-install_C_headers.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.pPdUMi + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.3 + '[' 1 -eq 1 ']' + '[' 1 -eq 1 ']' + export CPPFLAGS=-I/usr/include/udunits2 + CPPFLAGS=-I/usr/include/udunits2 + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + CONFIGURE_TOP=. + '[' 1 = 1 ']' ++ find . -name config.guess -o -name config.sub + for i in $(find ${CONFIGURE_TOP} -name config.guess -o -name config.sub) ++ basename ./autobld/config.guess + '[' -f /usr/lib/rpm/mageia/config.guess ']' ++ basename ./autobld/config.guess + cp -af /usr/lib/rpm/mageia/config.guess ./autobld/config.guess + for i in $(find ${CONFIGURE_TOP} -name config.guess -o -name config.sub) ++ basename ./autobld/config.sub + '[' -f /usr/lib/rpm/mageia/config.sub ']' ++ basename ./autobld/config.sub + cp -af /usr/lib/rpm/mageia/config.sub ./autobld/config.sub + /usr/lib/rpm/mageia/force-as-needed-for-shared-lib-in-libtool Forcing -Wl,--as-needed in configure/libtool to workaround libtool bug (cf http://lists.gnu.org/archive/html/libtool-patches/2004-06/msg00002.html) + /usr/lib/rpm/mageia/fix-libtool-ltmain-from-overlinking + /usr/lib/rpm/mageia/fix-libtool-from-moving-options-after-libs . Fixing libtool inside configure to pass -Wl,xxx options before libraries + /usr/lib/rpm/mageia/fix-dlsearch-path-in-libtool-for-multilib . lib64 Forcing run-time library search path definition in configure to prevent libtool from adding rpath for standard directories (configure was generated with libtool without support for autodetection) + ./configure --host=x86_64-mageia-linux-gnu --build=x86_64-mageia-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HOST=Mageia --enable-ncap2 --disable-static --disable-dependency-tracking --enable-nco_cplusplus --with-hdf5-plugin-path=/usr/lib64/hdf5/plugin --includedir=/usr/include/nco checking build system type... x86_64-mageia-linux-gnu checking host system type... x86_64-mageia-linux-gnu checking target system type... x86_64-mageia-linux-gnu ./configure: line 3579: git: command not found checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for x86_64-mageia-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking whether yytext is a pointer... yes checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-mageia-linux-gnu file names to x86_64-mageia-linux-gnu format... func_convert_file_noop checking how to convert x86_64-mageia-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-mageia-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-mageia-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-mageia-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-mageia-linux-gnu-strip... no checking for strip... strip checking for x86_64-mageia-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-mageia-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for creat... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for getopt.h... yes checking for libintl.h... yes checking for limits.h... yes checking for locale.h... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t... yes checking for gid_t... yes checking for ptrdiff_t... yes checking size of int*... 8 checking for gcc option to enable large file support... none needed ################################# # Test for netCDF # ################################ checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking for gcc options needed to detect all undeclared functions... none needed checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for netcdf_mem.h... yes checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... yes checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... no checking for acosf... no checking for asinf... no checking for atanf... no checking for atan2f... no checking for cosf... no checking for expf... no checking for fabsf... no checking for fmodf... no checking for log10f... no checking for logf... no checking for powf... no checking for sinf... no checking for sqrtf... no checking for tanf... no checking for erff... no checking for erfcf... no checking for gammaf... no checking for acoshf... no checking for asinhf... no checking for atanhf... no checking for coshf... no checking for sinhf... no checking for tanhf... no checking for ceilf... no checking for floorf... no checking for nearbyint... no checking for rint... no checking for round... no checking for trunc... no checking for nearbyintf... no checking for rintf... no checking for roundf... no checking for truncf... no checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOS build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... no checking for antlr... antlr configure: antlr library was found checking whether NCO C++ interface library libnco_c++ should be built... yes ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled ######################################## # Testing for CCR support # ######################################## checking where to put HDF5 plugins... /usr/lib64/hdf5/plugin checking whether Community Codec Repository library should be used... no checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS2 support # ######################################## checking for udunits2.h... yes checking for library containing ut_parse... -ludunits2 configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=7.2 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco_c++/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: ANTLR_INC............ ANTLR_ROOT........... AR_FLAGS............. cru CC................... gcc CFLAGS............... -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/udunits2 -I/usr/include CXX.................. g++ CXXFLAGS............. -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ENABLE_CCR........... no ENABLE_DAP........... yes ENABLE_GSL........... yes ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS2...... yes GSL_INC.............. /usr/include GSL_ROOT............. /usr HAVE_ANTLR........... antlr HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... /usr/lib64/hdf5/plugin HOST................. Mageia HOSTNAME............. LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm NETCDF_INC........... NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. x86_64-mageia-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* + /usr/bin/make -O -j16 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in data make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[2]: /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco/ncks: No such file or directory make[2]: [Makefile:588: in_4c.nc] Error 127 (ignored) make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -o big.nc big.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' ln -s -f in_zarr4 h0001 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' ln -s -f in_zarr4 h0002 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' ln -s -f in_zarr4 h0003 make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' Making all in src Making all in nco make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_cnv_arm.lo nco_cnv_arm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o 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-DPIC -o .libs/nco_dmn_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp 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-fcf-protection=full -fopenmp -std=gnu11 -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_cnv_csm.lo nco_cnv_csm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_cnf_dmn.lo nco_cnf_dmn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security 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-I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst': nco_lst_utl.c:38:89: warning: unknown escape sequence: '\.' 38 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ | ^ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_flt.c -fPIC -DPIC -o .libs/nco_flt.o nco_flt.c: In function 'nco_flt_hdf5_prs': nco_flt.c:330:37: warning: '%s' directive argument is null [-Wformat-overflow=] 330 | (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng); | ^~ make[3]: Leaving directory 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-std=gnu11 -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_grp_trv.lo nco_grp_trv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_omp.lo nco_omp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o nco_fl_utl.c: In function 'nco_fl_nm_prs': nco_fl_utl.c:1754:45: warning: '%d' directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~ nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from nco_fl_utl.h:26, from nco_fl_utl.c:10: In function 'sprintf', inlined from 'nco_fl_nm_prs' at nco_fl_utl.c:1754:8: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 9 and 19 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_cnf_typ.lo nco_cnf_typ.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_kd.lo nco_kd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_kd.c -fPIC -DPIC -o .libs/nco_kd.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rth_flt.lo nco_rth_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_pck.lo nco_pck.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o nco_pck.c: In function 'nco_pck_map_get': nco_pck.c:160:88: warning: '%s' directive argument is null [-Wformat-overflow=] 160 | (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 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'/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_ply_lst.c -fPIC -DPIC -o .libs/nco_ply_lst.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o nco_sng_utl.c: In function 'nm2sng_cdl': nco_sng_utl.c:270:41: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In file included from /usr/include/stdio.h:970, from nco_sng_utl.h:21, from nco_sng_utl.c:10: In function 'snprintf', inlined from 'nm2sng_cdl' at nco_sng_utl.c:270:2: /usr/include/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function 'nm2sng_fl': nco_sng_utl.c:466:41: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 466 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In function 'snprintf', inlined from 'nm2sng_fl' at nco_sng_utl.c:466:2: /usr/include/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c ncecat.c: In function 'main': ncecat.c:801:30: warning: '%02d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 801 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~ ncecat.c:801:29: note: directive argument in the range [0, 2147483646] 801 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~~~ In file included from /usr/include/stdio.h:970, from ncecat.c:46: In function 'sprintf', inlined from 'main' at ncecat.c:801:9: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_sph.c -fPIC -DPIC -o .libs/nco_sph.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncks.o ncks.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c ncap_lex.l: In function 'nco_yylex': ncap_lex.l:611:34: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 611 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:970, from ncap_lex.c:277: In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:611:13: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:587:36: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 587 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:587:8: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:634:34: warning: '%s' directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] 634 | (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:634:13: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 66 or more bytes (assuming 321) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_s1d.c -fPIC -DPIC -o .libs/nco_s1d.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o ncra.o ncra.c make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o nco_prn.c: In function 'nco_prn_var_val_lmt': nco_prn.c:1649:53: warning: '%s' directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1649 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:970, from nco_prn.h:22, from nco_prn.c:10: In function 'sprintf', inlined from 'nco_prn_var_val_lmt' at nco_prn.c:1649:10: /usr/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 19 and 118 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o nco_grp_utl.c: In function 'nco_chk_xtn': nco_grp_utl.c:2848:134: warning: '%s' directive argument is null [-Wformat-overflow=] 2848 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of HDF-EOS5 standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_he5,att_xtn_val); | ^~ nco_grp_utl.c:2865:132: warning: '%s' directive argument is null [-Wformat-overflow=] 2865 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of netCDF standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_nc,att_xtn_val); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4327:113: warning: '%s' directive argument is null [-Wformat-overflow=] 4327 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -release 5.3.3 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnco.la -rpath /usr/lib64 nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_crt.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_flt.lo nco_grp_utl.lo nco_grp_trv.lo nco_kd.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ply.lo nco_ply_lst.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_s1d.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_sph.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crti.o /usr/lib/gcc/x86_64-mageia-linux/15/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_crt.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_flt.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_kd.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ply.o .libs/nco_ply_lst.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_s1d.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_sph.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -O2 -g -fstack-protector-strong -m64 -fopenmp -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -fopenmp -L/usr/lib64 -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/x86_64-mageia-linux/15 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../.. -L/lib -L/usr/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-mageia-linux/15/crtendS.o /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crtn.o -Wl,-soname -Wl,libnco-5.3.3.so -o .libs/libnco-5.3.3.so libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-5.3.3.so" "libnco.so") libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -fopenmp -std=gnu11 -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ncrename ncrename.o -L/usr/lib64 ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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'nco_hgh.cc' || echo './'`nco_hgh.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_hgh.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_hgh.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_dmn.lo `test -f 'nco_dmn.cc' || echo './'`nco_dmn.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_dmn.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_dmn.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_fl.lo `test -f 'nco_fl.cc' || echo './'`nco_fl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_fl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_fl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_utl.lo `test -f 'nco_utl.cc' || echo './'`nco_utl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_utl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_utl.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_att.lo `test -f 'nco_att.cc' || echo './'`nco_att.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_att.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_att.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o libnco_c___la-nco_var.lo `test -f 'nco_var.cc' || echo './'`nco_var.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c nco_var.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_var.o make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -release 5.3.3 -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnco_c++.la -rpath /usr/lib64 libnco_c___la-nco_att.lo libnco_c___la-nco_dmn.lo libnco_c___la-nco_fl.lo libnco_c___la-nco_hgh.lo libnco_c___la-nco_utl.lo libnco_c___la-nco_var.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crti.o /usr/lib/gcc/x86_64-mageia-linux/15/crtbeginS.o .libs/libnco_c___la-nco_att.o .libs/libnco_c___la-nco_dmn.o .libs/libnco_c___la-nco_fl.o .libs/libnco_c___la-nco_hgh.o .libs/libnco_c___la-nco_utl.o .libs/libnco_c___la-nco_var.o -O2 -g -fstack-protector-strong -m64 -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -L/usr/lib64 -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/x86_64-mageia-linux/15 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-mageia-linux/15/../../.. -L/lib -L/usr/lib -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-mageia-linux/15/crtendS.o /usr/lib/gcc/x86_64-mageia-linux/15/../../../../lib64/crtn.o -Wl,-soname -Wl,libnco_c++-5.3.3.so -o .libs/libnco_c++-5.3.3.so libtool: link: (cd ".libs" && rm -f "libnco_c++.so" && ln -s "libnco_c++-5.3.3.so" "libnco_c++.so") libtool: link: ( cd ".libs" && rm -f "libnco_c++.la" && ln -s "../libnco_c++.la" "libnco_c++.la" ) make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' Making all in nco++ make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o nco_gsl.o nco_gsl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o sym_cls.o sym_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o sdo_utl.o sdo_utl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o NcapVar.o NcapVar.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_cls.o fmc_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o NcapVarVector.o NcapVarVector.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o prs_cls.o prs_cls.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2_att.o ncap2_att.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o Invoke.o Invoke.cc In file included from libnco++.hh:26, from Invoke.cc:13: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from fmc_gsl_cls.hh:12: ../../config.h:443:9: note: this is the location of the previous definition 443 | #define NCO_GSL_VERSION 207 | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2.o ncap2.cc In file included from libnco++.hh:26, from ncap2.cc:80: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from fmc_gsl_cls.hh:12: ../../config.h:443:9: note: this is the location of the previous definition 443 | #define NCO_GSL_VERSION 207 | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoParser.o ncoParser.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoLexer.o ncoLexer.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_gsl_cls.o fmc_gsl_cls.cc In file included from fmc_gsl_cls.cc:10: fmc_gsl_cls.hh:49:11: warning: 'NCO_GSL_VERSION' redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ In file included from ncap2_att.hh:5, from ncap2_utl.hh:60, from ncoGrammar.g:31, from fmc_gsl_cls.hh:43: ../../config.h:443:9: note: this is the location of the previous definition 443 | #define NCO_GSL_VERSION 207 | ^~~~~~~~~~~~~~~ In file included from nco_gsl.hh:31, from fmc_gsl_cls.cc:11: ../../config.h:443:9: warning: 'NCO_GSL_VERSION' redefined 443 | #define NCO_GSL_VERSION 207 | ^~~~~~~~~~~~~~~ fmc_gsl_cls.hh:49:11: note: this is the location of the previous definition 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncap2_utl.o ncap2_utl.cc make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o fmc_all_cls.o fmc_all_cls.cc fmc_all_cls.cc: In member function 'virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)': fmc_all_cls.cc:1965:60: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 1965 | snprintf(units_new_sng,NCO_MAX_LEN_DATE_SNG,"days since %d-01-01 00:00:00",lcl_tm_sct.year); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from fmc_all_cls.hh:14, from fmc_all_cls.cc:10: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)' at fmc_all_cls.cc:1965:24: /usr/include/bits/stdio2.h:68:35: note: '__builtin___snprintf_chk' output between 28 and 38 bytes into a destination of size 27 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/udunits2 -I/usr/include -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -c -o ncoTree.o ncoTree.cpp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ../nco/libnco.la -lantlr -L/usr/lib64 -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib64 -lgsl -lgslcblas -lm libtool: link: g++ -O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Nothing to be done for 'all-am'. Making all in man make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' + make -C doc html pdf make: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' rm -rf nco.htp if /bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi nco.texi:392: warning: no htmlxref.cnf entry found for `dir' TEXINPUTS="../autobld:$TEXINPUTS" \ MAKEINFO='/bin/sh '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/missing' makeinfo -I .' \ texi2dvi --pdf --batch -I . --build-dir=nco.t2p -o nco.pdf \ nco.texi This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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--cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [102] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8437--8437 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8440--8440 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8441--8441 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8442--8442 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [103] [104] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8609--8609 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8609--8609 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8609--8609 [][] [105] [106] [107] [108] [109] 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[126] [127] [128] [129] [130] [131] Underfull \hbox (badness 10000) in paragraph at lines 10640--10647 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [132] [133] [134] [135] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11103--11103 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [136] [137] [138] [139] [140] [141] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11514--11514 [][] [142] [143] [144] [145] [146] [147] [148] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12230--12230 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12237--12237 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [150] [151] [152] [153] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12616--12616 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12617--12617 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12618--12618 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12619--12619 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12627--12627 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [154] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12669--12669 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [155] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12744--12744 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [156] [157] [158] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12932--12932 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [159] [160] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] [161] [162] Underfull \hbox (badness 6741) in paragraph at lines 13370--13415 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [163] [164] [165] [166] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13784--13805 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [167] [168] [169] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13869--13869 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [170] [171] [172] [173] [174] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14286--14286 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14289--14289 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [175] [176] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14447--14447 [][] [177] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14487--14487 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14504--14504 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [178] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14533--14533 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [179] [180] [181] [182] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14806--14806 [][] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14911--14911 [][] [184] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14930--14930 [][] [185] [186] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15101--15101 [][] [187] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15127--15127 [][] 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15768--15768 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15768--15768 [][] [197] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15857--15857 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15882--15882 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [198] [199] [200] [201] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16084--16084 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16101--16101 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [203] [204] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16242--16242 [][] [205] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16310--16310 [][] [206] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16391--16391 [][] [207] [208] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16518--16518 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16535--16535 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16568--16568 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [209] [210] [211] [212] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16852--16853 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16860--16861 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16864--16865 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16868--16869 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16872--16873 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16893--16894 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16911--16911 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16912--16912 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16919--16919 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16944--16945 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17023--17024 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17024--17025 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17025--17026 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17026--17026 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17026--17027 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17035--17036 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17044--17045 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17045--17045 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17047--17048 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17048--17048 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17109--17109 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [213] [214] [215] [216] [217] [218] [219] [220] Underfull \hbox (badness 10000) in paragraph at lines 17186--17188 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17199--17200 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17217--17218 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [221] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17242--17242 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17269--17269 [][] [222] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17285--17285 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17286--17286 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17287--17287 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17294--17294 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17295--17295 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17296--17296 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [223] [224] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17402--17402 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17404--17404 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [225] [226] [227] [228] Underfull \hbox (badness 10000) in paragraph at lines 17927--17943 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [229] Underfull \hbox (badness 10000) in paragraph at lines 17987--18003 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18073--18083 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [230] [231] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18286--18286 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18286--18286 [][] [232] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18368--18368 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18374--18374 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [233] [234] [235] [236] [237] [238] [239] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19006--19006 [][] [240] Overfull \hbox (20.69046pt too wide) in paragraph at lines 19061--19061 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [241] [242] [243] [244] [245] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19539--19539 [][] [246] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19559--19559 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19563--19563 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19567--19567 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19616--19616 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [247] [248] [249] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19832--19832 [][] [250] [251] [252] [253] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20205--20205 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20208--20208 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20209--20209 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20210--20210 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20219--20219 [][] [254] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20400--20400 [][] [255] [256] [257] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20674--20674 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20675--20675 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [258] [259] [260] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20944--20944 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20946--20946 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20948--20948 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] [261] Underfull \hbox (badness 10000) in paragraph at lines 20989--21005 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21045--21045 [][] [262] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21090--21090 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 21274--21274 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21275--21275 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21305--21305 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [265] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21311--21311 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21312--21312 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] [266] [267] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21451--21451 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21458--21458 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21460--21460 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [268] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21528--21528 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21534--21534 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21561--21561 [][] [269] [270] [271] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21788--21788 [][] [272] [273] [274] [275] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22100--22100 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22106--22106 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [276] [277] [278] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22347--22347 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [279] [280] [281] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22620--22620 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [282] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22667--22667 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22668--22668 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22673--22673 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [283] [284] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22875--22875 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22876--22876 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22879--22879 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22880--22880 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [285] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22964--22964 []@texttt 1964-03-13T21:09:0.000000[] [286] [287] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] [288] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23147--23147 [][] [289] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] [290] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] [291] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] [292] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23497--23497 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23497--23497 [][] [293] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23663--23663 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23684--23684 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23698--23698 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23699--23699 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23700--23700 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23701--23701 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23702--23702 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23703--23703 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23704--23704 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [295] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23789--23789 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [296] [297] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23932--23932 [][] [298] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23997--23997 [][] [299] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24036--24036 [][] [300] [301] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24200--24200 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24282--24282 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24285--24285 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] [302] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24290--24290 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [303] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24401--24401 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24517--24517 [][] [304] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24560--24560 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24560--24560 [][] Underfull \hbox (badness 10000) in paragraph at lines 24575--24590 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24608--24608 [][] [305] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24683--24683 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24696--24696 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24704--24704 [][] [306] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] [307] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] [308] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24886--24886 []@texttt # Change values to be sure original values are not copied in followi ng step[] [309] [310] [311] [312] [313] Underfull \hbox (badness 10000) in paragraph at lines 25302--25307 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [314] Underfull \hbox (badness 10000) in paragraph at lines 25308--25314 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [315] [316] [317] [318] [319] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25692--25692 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25705--25705 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [320] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25762--25762 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [321] [322] [323] [324] [325] [326] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26243--26243 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [327] [328] Underfull \hbox (badness 6741) in paragraph at lines 26522--26533 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [329] [330] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26808--26808 [][] [331] [332] Underfull \hbox (badness 10000) in paragraph at lines 26911--26913 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 26914--26919 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26923--26925 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26929--26931 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [333] [334] [335] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27104--27104 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27104--27104 [][] Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27119--27139 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . 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too wide) in paragraph at lines 27934--27934 [][] [344] [345] [346] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28225--28287 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28225--28287 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [347] [348] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28343--28343 [][] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28366--28366 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28366--28366 [][] [349] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28444--28444 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28491--28491 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28491--28491 [][] [350] [351] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28611--28611 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28632--28632 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [352] [353] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28768--28768 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [354] [355] [356] [357] [358] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29282--29282 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29284--29284 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [359] [360] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29472--29472 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29472--29472 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29472--29472 [][] [361] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29535--29535 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29544--29544 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29558--29558 [][] [362] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] [363] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29673--29673 [][] [364] [365] Underfull \hbox (badness 10000) in paragraph at lines 29797--29797 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29798--29798 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 29828--29828 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29829--29829 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [366] [367] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30019--30019 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30020--30020 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [368] [369] [370] [371] [372] [373] [374] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30572--30572 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30572--30572 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30584--30584 [][] [375] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30613--30613 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30658--30658 [][] [376] [377] Overfull \hbox (49.4339pt too wide) in paragraph at lines 30747--30747 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] [378] [379] [380] [381] Chapter 5 [382] [383] [384] [385] Chapter 6 [386] [387] Chapter 7 [388] (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [389] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [390] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl_grp.sh [391] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox 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\hbox (26.43913pt too wide) in paragraph at lines 5--5 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21--21 [][] [402]) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/ann_avg_grp.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 12--12 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15--15 [][] [403]) [404] (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/mcc.sh Overfull \hbox (20.69044pt too wide) in paragraph at lines 20--20 [][][][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21--21 [][][] [405] Overfull \hbox (72.42863pt too wide) in paragraph at lines 41--41 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 48--48 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 49--49 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 51--51 [][] Overfull \hbox (89.6747pt too wide) in paragraph 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wide) in paragraph at lines 25--25 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/bi_interp.nco [409] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [410] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [411] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [412] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [413] [414] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32113--32113 [][] Chapter 9 [415] [416] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [417] [418] [419] [420] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32423--32423 [][] [421] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [422] Chapter 10 [423] [424] (General Index) [425] [426] [427] [428] ) (see the transcript file for additional information) Output written on nco.pdf (432 pages, 1674211 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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climatological monthly means into NH winter[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8416--8416 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8418--8418 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8437--8437 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8440--8440 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8441--8441 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8442--8442 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 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wide) in paragraph at lines 12237--12237 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [148] [149] [150] [151] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12616--12616 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12617--12617 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12618--12618 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12619--12619 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12627--12627 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [152] Overfull \hbox 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wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] [159] [160] Underfull \hbox (badness 6741) in paragraph at lines 13370--13415 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [161] [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13784--13805 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13869--13869 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14286--14286 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14289--14289 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14447--14447 [][] [175] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14487--14487 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14504--14504 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [176] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14533--14533 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [177] [178] [179] [180] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14806--14806 [][] [181] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14911--14911 [][] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14930--14930 [][] [183] [184] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15101--15101 [][] [185] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15127--15127 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15138--15138 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15187--15187 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15187--15187 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15439--15439 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15581--15581 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15707--15716 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15726--15726 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15768--15768 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15768--15768 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15768--15768 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15768--15768 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15857--15857 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15882--15882 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16084--16084 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16101--16101 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16242--16242 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16310--16310 [][] [204] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16391--16391 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16518--16518 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16535--16535 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16568--16568 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16852--16853 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16860--16861 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16864--16865 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16868--16869 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16872--16873 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16893--16894 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16911--16911 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16912--16912 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16919--16919 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16944--16945 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17023--17024 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17024--17025 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17025--17026 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17026--17026 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17026--17027 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17035--17036 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17044--17045 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17045--17045 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17047--17048 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17048--17048 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17109--17109 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] [218] Underfull \hbox (badness 10000) in paragraph at lines 17186--17188 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17199--17200 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17217--17218 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [219] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17242--17242 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17269--17269 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17285--17285 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17286--17286 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17287--17287 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17294--17294 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17295--17295 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17296--17296 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17402--17402 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17404--17404 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 17927--17943 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 17987--18003 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18073--18083 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18286--18286 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18286--18286 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18368--18368 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18374--18374 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19006--19006 [][] [238] Overfull \hbox (20.69046pt too wide) in paragraph at lines 19061--19061 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19539--19539 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19559--19559 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19563--19563 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19567--19567 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19616--19616 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19832--19832 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20205--20205 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20208--20208 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20209--20209 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20210--20210 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20219--20219 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20400--20400 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20674--20674 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20675--20675 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20944--20944 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20946--20946 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20948--20948 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 20989--21005 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21045--21045 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21090--21090 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21274--21274 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21275--21275 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21305--21305 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21311--21311 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21312--21312 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21451--21451 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21458--21458 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21460--21460 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21528--21528 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21534--21534 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21561--21561 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21788--21788 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22100--22100 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22106--22106 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22347--22347 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22620--22620 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22667--22667 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22668--22668 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22673--22673 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22875--22875 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22876--22876 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22879--22879 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22880--22880 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22964--22964 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23147--23147 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23497--23497 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23497--23497 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23663--23663 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23684--23684 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23698--23698 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23699--23699 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23700--23700 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23701--23701 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23702--23702 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23703--23703 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23704--23704 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23789--23789 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23932--23932 [][] [296] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23997--23997 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24036--24036 [][] [298] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24200--24200 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24282--24282 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24285--24285 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] [300] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24290--24290 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24401--24401 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24517--24517 [][] [302] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24560--24560 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24560--24560 [][] Underfull \hbox (badness 10000) in paragraph at lines 24575--24590 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24608--24608 [][] [303] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24683--24683 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24696--24696 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24704--24704 [][] [304] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] [305] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] [306] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24886--24886 []@texttt # Change values to be sure original values are not copied in followi ng step[] [307] [308] [309] [310] [311] Underfull \hbox (badness 10000) in paragraph at lines 25302--25307 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [312] Underfull \hbox (badness 10000) in paragraph at lines 25308--25314 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [313] [314] [315] [316] [317] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25692--25692 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25705--25705 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [318] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25762--25762 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [319] [320] [321] [322] [323] [324] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26243--26243 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [325] [326] Underfull \hbox (badness 6741) in paragraph at lines 26522--26533 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [327] [328] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26808--26808 [][] [329] [330] Underfull \hbox (badness 10000) in paragraph at lines 26911--26913 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 26914--26919 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26923--26925 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26929--26931 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [331] [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27104--27104 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27104--27104 [][] Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27119--27139 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . Overfull \hbox (44.01453pt too wide) in paragraph at lines 27156--27156 [][] [334] [335] [336] [337] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27577--27577 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27577--27577 [][] [338] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27586--27586 [][] [339] [340] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27825--27825 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27825--27825 [][] [341] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27898--27898 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27934--27934 [][] [342] [343] [344] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28225--28287 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28225--28287 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [345] [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28343--28343 [][] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28366--28366 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28366--28366 [][] [347] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28444--28444 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28491--28491 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28491--28491 [][] [348] [349] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28611--28611 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull 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[]@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] [376] [377] [378] [379] Chapter 5 [380] [381] [382] [383] Chapter 6 [384] [385] Chapter 7 [386] (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [387] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [388] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl_grp.sh [389] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox 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paragraph at lines 31--31 [][] ) Chapter 8 [411] [412] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32113--32113 [][] Chapter 9 [413] [414] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [415] [416] [417] [418] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32423--32423 [][] [419] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [420] Chapter 10 [421] [422] (General Index) [423] [424] (./nco.cps [425] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt 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[448] ) (see the transcript file for additional information)< /usr/share/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb> Output written on nco.pdf (456 pages, 1955812 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.27 (TeX Live 2025/Mageia) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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(55.18257pt too wide) in paragraph at lines 7473--7473 [][] Underfull \hbox (badness 10000) in paragraph at lines 7507--7515 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [89] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7690--7690 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7690--7690 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7690--7690 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7690--7690 [][] [91] [92] [93] [94] [95] [96] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8212--8212 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8212--8212 [][] [97] [98] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8352--8352 [][] [99] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8411--8411 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8416--8416 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8418--8418 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8437--8437 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8440--8440 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8441--8441 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8442--8442 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [101] [102] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8609--8609 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8609--8609 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8609--8609 [][] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] Overfull \hbox (60.93126pt too wide) in paragraph at lines 9555--9555 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 9555--9555 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 9555--9555 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 9555--9555 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9555--9555 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 9555--9555 [][] [114] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9580--9580 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9580--9580 [][] [115] [116] [117] [118] [119] [120] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9983--9983 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9983--9983 [][] [121] [122] [123] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10195--10195 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10195--10195 [][] [124] [125] [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 10640--10647 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [130] [131] [132] [133] Overfull \hbox (55.18257pt too wide) in paragraph at lines 11103--11103 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [134] [135] [136] [137] [138] [139] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11514--11514 [][] [140] [141] [142] [143] [144] [145] [146] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12230--12230 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] [147] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12237--12237 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [148] [149] [150] [151] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12616--12616 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12617--12617 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12618--12618 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12619--12619 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12627--12627 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [152] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12669--12669 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [153] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12744--12744 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [154] [155] [156] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12932--12932 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [157] [158] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13132--13132 [][] [159] [160] Underfull \hbox (badness 6741) in paragraph at lines 13370--13415 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [161] [162] [163] [164] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13784--13805 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [165] [166] [167] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13869--13869 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [168] [169] [170] [171] [172] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14286--14286 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14289--14289 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [173] [174] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14447--14447 [][] [175] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14487--14487 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14504--14504 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [176] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14533--14533 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [177] [178] [179] [180] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14806--14806 [][] [181] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14911--14911 [][] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14930--14930 [][] [183] [184] Overfull \hbox (83.92601pt too wide) in paragraph at lines 15101--15101 [][] [185] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15127--15127 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15138--15138 [][] [186] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15187--15187 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15187--15187 [][] [187] [188] [189] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15439--15439 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [190] [191] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15581--15581 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 15707--15716 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15726--15726 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15768--15768 [][] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15768--15768 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 15768--15768 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15768--15768 [][] [195] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15857--15857 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15882--15882 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [196] [197] [198] [199] Overfull \hbox (147.16158pt too wide) in paragraph at lines 16084--16084 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [200] Overfull \hbox (20.69044pt too wide) in paragraph at lines 16101--16101 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [201] [202] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16234--16234 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16242--16242 [][] [203] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16310--16310 [][] [204] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16379--16379 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16391--16391 [][] [205] [206] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16518--16518 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16535--16535 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16568--16568 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [207] [208] [209] [210] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16852--16853 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16860--16861 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16864--16865 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16868--16869 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16872--16873 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16893--16894 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16911--16911 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16912--16912 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16919--16919 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16944--16945 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 17023--17024 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 17024--17025 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 17025--17026 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 17026--17026 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 17026--17027 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 17035--17036 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 17044--17045 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 17045--17045 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 17047--17048 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 17048--17048 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 17109--17109 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [211] [212] [213] [214] [215] [216] [217] [218] Underfull \hbox (badness 10000) in paragraph at lines 17186--17188 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17199--17200 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17217--17218 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [219] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17242--17242 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17269--17269 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17269--17269 [][] [220] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17285--17285 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17286--17286 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17287--17287 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17294--17294 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17295--17295 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17296--17296 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [221] [222] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17402--17402 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17404--17404 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [223] [224] [225] [226] Underfull \hbox (badness 10000) in paragraph at lines 17927--17943 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [227] Underfull \hbox (badness 10000) in paragraph at lines 17987--18003 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 18073--18083 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [228] [229] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18286--18286 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18286--18286 [][] [230] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18368--18368 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18374--18374 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [231] [232] [233] [234] [235] [236] [237] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19006--19006 [][] [238] Overfull \hbox (20.69046pt too wide) in paragraph at lines 19061--19061 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [239] [240] [241] [242] [243] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19539--19539 [][] [244] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19559--19559 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 19563--19563 []@texttt [-n @textttsl nco_opt@texttt ] [--npo] [--no_cll_msr] [--no_frm_trm] [--no_ntv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19567--19567 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19616--19616 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [245] [246] [247] Overfull \hbox (38.26584pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 19832--19832 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 19832--19832 [][] [248] [249] [250] [251] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20205--20205 []@texttt If the latest features that you want are actually implemented in the [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 20208--20208 []@texttt However, if the latest features that you want are implemented in the [] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20209--20209 []@texttt scripts themselves, then you can either invoke Zender's scripts[] Overfull \hbox (32.51715pt too wide) in paragraph at lines 20210--20210 []@texttt directly (as in the second set of examples), or copy those scripts[] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20219--20219 [][] [252] Overfull \hbox (15.27109pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (124.49615pt too wide) in paragraph at lines 20400--20400 [][] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20400--20400 [][] [253] [254] [255] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20674--20674 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20675--20675 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [256] [257] [258] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20944--20944 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20946--20946 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20948--20948 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 20987--20987 [][] [259] Underfull \hbox (badness 10000) in paragraph at lines 20989--21005 @texttt 01.nc[]@textrm , and @texttt v2.LR.historical_ Overfull \hbox (20.69044pt too wide) in paragraph at lines 21045--21045 [][] [260] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21090--21090 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [261] [262] Underfull \hbox (badness 10000) in paragraph at lines 21274--21274 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 21275--21275 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 21305--21305 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] [263] Overfull \hbox (72.42863pt too wide) in paragraph at lines 21311--21311 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 21312--21312 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21349--21349 [][] [264] [265] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21451--21451 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21458--21458 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21460--21460 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [266] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21528--21528 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21534--21534 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21561--21561 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21561--21561 [][] [267] [268] [269] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21788--21788 [][] [270] [271] [272] [273] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22100--22100 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22106--22106 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] [274] [275] [276] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22347--22347 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [277] [278] [279] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22620--22620 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [280] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22667--22667 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22668--22668 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22673--22673 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [281] [282] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22875--22875 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22876--22876 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22879--22879 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22880--22880 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [283] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22964--22964 []@texttt 1964-03-13T21:09:0.000000[] [284] [285] Overfull \hbox (72.75797pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 23084--23084 [][] [286] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23147--23147 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23147--23147 [][] [287] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23226--23226 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23266--23266 [][] [288] Overfull \hbox (164.73697pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23266--23266 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 23266--23266 [][] [289] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23361--23361 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23397--23397 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23429--23429 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23429--23429 [][] [290] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23461--23461 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23497--23497 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23497--23497 [][] [291] Overfull \hbox (26.76846pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23565--23565 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23663--23663 [][] [292] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23684--23684 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23698--23698 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23699--23699 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23700--23700 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23701--23701 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23702--23702 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23703--23703 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23704--23704 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [293] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23789--23789 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [294] [295] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23902--23902 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23932--23932 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23932--23932 [][] [296] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23997--23997 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23997--23997 [][] [297] Overfull \hbox (123.18262pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 24036--24036 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 24036--24036 [][] [298] [299] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24200--24200 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 24282--24282 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 24285--24285 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] [300] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24290--24290 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [301] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24401--24401 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 24408--24408 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 24447--24447 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24517--24517 [][] [302] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24560--24560 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24560--24560 [][] Underfull \hbox (badness 10000) in paragraph at lines 24575--24590 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24608--24608 [][] [303] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24608--24608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24683--24683 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24696--24696 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24704--24704 [][] [304] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24806--24806 [][] [305] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24806--24806 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24806--24806 [][] [306] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24886--24886 []@texttt # Change values to be sure original values are not copied in followi ng step[] [307] [308] [309] [310] [311] Underfull \hbox (badness 10000) in paragraph at lines 25302--25307 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [312] Underfull \hbox (badness 10000) in paragraph at lines 25308--25314 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [313] [314] [315] [316] [317] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25692--25692 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25705--25705 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [318] Overfull \hbox (37.93651pt too wide) in paragraph at lines 25762--25762 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth _dbl|flt][] [319] [320] [321] [322] [323] [324] Overfull \hbox (14.94176pt too wide) in paragraph at lines 26243--26243 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] [325] [326] Underfull \hbox (badness 6741) in paragraph at lines 26522--26533 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [327] [328] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26808--26808 [][] [329] [330] Underfull \hbox (badness 10000) in paragraph at lines 26911--26913 []@reducedrm MOAB[] Underfull \hbox (badness 10000) in paragraph at lines 26914--26919 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26923--26925 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26926--26928 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26929--26931 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26932--26934 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [331] [332] [333] Overfull \hbox (107.25009pt too wide) in paragraph at lines 27104--27104 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 27104--27104 [][] Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 27119--27139 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 27119--27139 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . 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too wide) in paragraph at lines 27934--27934 [][] [342] [343] [344] Overfull \hbox (3.6096pt too wide) in paragraph at lines 28225--28287 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers, Underfull \hbox (badness 10000) in paragraph at lines 28225--28287 @texttt nBioLayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers, [345] [346] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28343--28343 [][] Overfull \hbox (15.27109pt too wide) in paragraph at lines 28366--28366 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28366--28366 [][] [347] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28444--28444 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 28491--28491 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28491--28491 [][] [348] [349] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28611--28611 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28632--28632 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [350] [351] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28767--28767 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28768--28768 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [352] [353] [354] [355] [356] Overfull \hbox (61.26059pt too wide) in paragraph at lines 29282--29282 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 29284--29284 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [357] [358] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29472--29472 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29472--29472 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 29472--29472 [][] [359] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29535--29535 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29544--29544 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29558--29558 [][] [360] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] [361] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29673--29673 [][] Overfull \hbox (78.50665pt too wide) in paragraph at lines 29673--29673 [][] [362] [363] Underfull \hbox (badness 10000) in paragraph at lines 29797--29797 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29798--29798 []@texttt ncremap --vrt_in=vrt.nc -- Overfull \hbox (15.27109pt too wide) in paragraph at lines 29828--29828 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29829--29829 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [364] [365] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30019--30019 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30020--30020 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [366] [367] [368] [369] [370] [371] [372] Overfull \hbox (187.40239pt too wide) in paragraph at lines 30572--30572 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 30572--30572 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 30584--30584 [][] [373] Overfull \hbox (216.14583pt too wide) in paragraph at lines 30613--30613 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 30632--30632 [][] Overfull \hbox (5579.6715pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (1659.06645pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30658--30658 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 30658--30658 [][] [374] [375] Overfull \hbox (49.4339pt too wide) in paragraph at lines 30747--30747 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] [376] [377] [378] [379] Chapter 5 [380] [381] [382] [383] Chapter 6 [384] [385] Chapter 7 [386] (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [387] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [388] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/cmb_fl_grp.sh [389] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox 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at lines 52--52 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 61--61 [][][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 63--63 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 68--68 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 71--71 [][] [404] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 77--77 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/mcc_grp.sh [405]) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/rgr.sh [406] Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 6--6 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10--10 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/bi_interp.nco [407] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [408] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [409] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [410] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [411] [412] Overfull \hbox (60.93126pt too wide) in paragraph at lines 32113--32113 [][] Chapter 9 [413] [414] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [415] [416] [417] [418] Overfull \hbox (37.93651pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 32423--32423 [][] [419] Overfull \hbox (693.28691pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32423--32423 [][] [420] Chapter 10 [421] [422] (General Index) [423] [424] (./nco.cps [425] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [426] [427] [428] [429] [430] Overfull \hbox (37.49283pt too wide) in paragraph at lines 775--775 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2176--2176 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2182--2182 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [444] [445] [446] [447]) [448] ) (see the transcript file for additional information)< /usr/share/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb> Output written on nco.pdf (456 pages, 1955823 bytes). Transcript written on nco.log. Moved nco.pdf to /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.pdf make: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.gLjhMZ + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + '[' 1 -eq 1 ']' + '[' /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT '!=' / ']' + rm -rf /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT ++ dirname /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT + mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + mkdir /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT + CFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wformat -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -m64 -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection=full ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-O1 -Wl,--build-id=sha1 -Wl,--enable-new-dtags -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.3.3 + '[' 1 -eq 1 ']' + /usr/bin/make install DESTDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT 'INSTALL=/usr/bin/install -p' Making install in data make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' /usr/bin/install -p ncclimo ncremap ncz2psx ncchecker '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/data' Making install in src make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' Making install in nco make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco.la '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco-5.3.3.so /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64/libnco-5.3.3.so libtool: install: (cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64 && { ln -s -f libnco-5.3.3.so libnco.so || { rm -f libnco.so && ln -s libnco-5.3.3.so libnco.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco.lai /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64/libnco.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncatted /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncbo /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncecat /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncflint /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncks /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncpdq /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncra /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncrename /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncwa /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncwa /usr/bin/make install-exec-hook make[4]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[4]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco' Making install in nco_c++ make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco_c++.la '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco_c++-5.3.3.so /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64/libnco_c++-5.3.3.so libtool: install: (cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64 && { ln -s -f libnco_c++-5.3.3.so libnco_c++.so || { rm -f libnco_c++.so && ln -s libnco_c++-5.3.3.so libnco_c++.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco_c++.lai /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/lib64/libnco_c++.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/include/nco' /usr/bin/install -p -m 644 libnco_c++.hh nco_dmn.hh nco_hgh.hh nco_var.hh nco_att.hh nco_fl.hh nco_utl.hh '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/include/nco' make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco_c++' Making install in nco++ make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncap2 '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncap2 /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncap2 make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src/nco++' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' make[3]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/src' Making install in man make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/man' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/man' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/man/man1' /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 ncchecker.1 '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/man/man1' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/man' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/man' Making install in doc make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/info' /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 ./nco.info-5 '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/info' install-info --info-dir='/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/info' '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/info/nco.info' make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc' make[1]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3' make[2]: Entering directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3' make[1]: Leaving directory '/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3' + find /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT -name '*.la' -delete + chrpath -d -k /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncap2 /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncatted /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncbo /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncchecker /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncclimo /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncdiff /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncea /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncecat /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/nces /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncflint /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncks /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncpdq /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncra /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncrcat /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncremap /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncrename /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncwa /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncz2psx `/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncchecker' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncclimo' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncremap' probably isn't an ELF file. elf_open: Exec format error `/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/bin/ncz2psx' probably isn't an ELF file. elf_open: Exec format error + : + /usr/bin/find-debuginfo -j16 --strict-build-id -m -i --build-id-seed 5.3.3-1.mga10 --unique-debug-suffix -5.3.3-1.mga10.x86_64 --unique-debug-src-base nco-5.3.3-1.mga10.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3 find-debuginfo: starting Extracting debug info from 12 files DWARF-compressing 12 files sepdebugcrcfix: Updated 12 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/nco-5.3.3-1.mga10.x86_64 cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + '[' -n '' ']' + /usr/share/spec-helper/clean_files + '[' -n '' ']' + /usr/share/spec-helper/compress_files .xz + '[' -n '' ']' + /usr/share/spec-helper/relink_symlinks + '[' -n '' ']' + /usr/share/spec-helper/clean_perl + '[' -n '' ']' + /usr/share/spec-helper/lib_symlinks + '[' -n '' ']' + /usr/share/spec-helper/gprintify + '[' -n '' ']' + /usr/share/spec-helper/fix_mo + '[' -n '' ']' + /usr/share/spec-helper/fix_pamd + '[' -n '' ']' + /usr/share/spec-helper/remove_info_dir + '[' -n '' ']' + /usr/share/spec-helper/fix_eol + '[' -n '' ']' + /usr/share/spec-helper/check_desktop_files + '[' -n '' ']' + /usr/share/spec-helper/check_elf_files + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncchecker from /usr/bin/env bash to #!/usr/bin/bash + env -u SOURCE_DATE_EPOCH /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j16 + /usr/lib/rpm/redhat/brp-python-hardlink Reading /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/SPECPARTS/rpm-debuginfo.specpart Processing files: nco-5.3.3-1.mga10.x86_64 Executing(%doc): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.cLDVbG + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + cd nco-5.3.3 + DOCDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/README /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/README.md /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/rtfm.txt /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.html /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.pdf /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.css /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/index.shtml /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/TODO /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/ChangeLog /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco.png /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nco_news.shtml /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/nsf.png /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/doc/nco + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.fopLyy + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + cd nco-5.3.3 + LICENSEDIR=/home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/licenses/nco + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/licenses/nco + cp -pr /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/nco-5.3.3/doc/LICENSE /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT/usr/share/licenses/nco + RPM_EC=0 ++ jobs -p + exit 0 Provides: nco = 5.3.3-1.mga10 nco(x86-64) = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libnco-5.3.3.so()(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: lib64nco5.3.3-5.3.3-1.mga10.x86_64 Provides: lib64nco5.3.3 = 5.3.3-1.mga10 lib64nco5.3.3(x86-64) = 5.3.3-1.mga10 libnco-5.3.3.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnetcdf.so.19()(64bit) libudunits2.so.0()(64bit) Processing files: lib64nco_c++5.3.3-5.3.3-1.mga10.x86_64 Provides: lib64nco_c++5.3.3 = 5.3.3-1.mga10 lib64nco_c++5.3.3(x86-64) = 5.3.3-1.mga10 libnco_c++-5.3.3.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) Processing files: lib64nco-devel-5.3.3-1.mga10.x86_64 Provides: devel(libnco-5.3.3(64bit)) devel(libnco_c++-5.3.3(64bit)) lib64nco-devel = 5.3.3-1.mga10 lib64nco-devel(x86-64) = 5.3.3-1.mga10 nco-devel = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: devel(libgcc_s(64bit)) devel(libgomp(64bit)) devel(libgsl(64bit)) devel(libm(64bit)) devel(libnetcdf(64bit)) devel(libstdc++(64bit)) devel(libudunits2(64bit)) Processing files: nco-debugsource-5.3.3-1.mga10.x86_64 Provides: nco-debugsource = 5.3.3-1.mga10 nco-debugsource(x86-64) = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debuginfo-5.3.3-1.mga10.x86_64 Provides: debuginfo(build-id) = 07effc8f169a27cefc1c94392012a562db9bd492 debuginfo(build-id) = 12f511234ed339371aec9ff48245ead28a8fd4d1 debuginfo(build-id) = 1a89b7febed74bfc81ed6776164c1a56a3cd38e4 debuginfo(build-id) = 38cc1bcd3ed2a1bc7c53b45e9a03b34338e017b2 debuginfo(build-id) = 6f85375333c9f005d7880e845ded8a345f16c449 debuginfo(build-id) = 74a874d1ef91e01b082b97aa405a3cdd5913cd60 debuginfo(build-id) = 7d62df59a3911ace3118087414300e42a149767c debuginfo(build-id) = bd18db62571d677981edb4437c9ddb825525c07b debuginfo(build-id) = e83958786880934f3deeee84767ae55019692a86 debuginfo(build-id) = f06473b572f10ad9410514fb30a9f57cd3517a99 nco-debuginfo = 5.3.3-1.mga10 nco-debuginfo(x86-64) = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.3-1.mga10 Processing files: lib64nco5.3.3-debuginfo-5.3.3-1.mga10.x86_64 Provides: debuginfo(build-id) = a44eb8e3ec261671f1471657e28ff5e37bf9a30a lib64nco5.3.3-debuginfo = 5.3.3-1.mga10 lib64nco5.3.3-debuginfo(x86-64) = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.3-1.mga10 Processing files: lib64nco_c++5.3.3-debuginfo-5.3.3-1.mga10.x86_64 Provides: debuginfo(build-id) = 2156a80cdb8b91b64f9c2087963eff6ad2b43f9a lib64nco_c++5.3.3-debuginfo = 5.3.3-1.mga10 lib64nco_c++5.3.3-debuginfo(x86-64) = 5.3.3-1.mga10 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.3.3-1.mga10 Checking for unpackaged file(s): /usr/lib/rpm/check-files /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build/BUILDROOT Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco_c++5.3.3-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco-devel-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco_c++5.3.3-debuginfo-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco5.3.3-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/lib64nco5.3.3-debuginfo-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-debugsource-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-5.3.3-1.mga10.x86_64.rpm Wrote: /home/pterjan/rpmbuild/RPMS/x86_64/nco-debuginfo-5.3.3-1.mga10.x86_64.rpm Executing(rmbuild): /bin/sh -e /home/pterjan/rpmbuild/tmp/rpm-tmp.lfkmnB + umask 022 + cd /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + test -d /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + rm -rf /home/pterjan/rpmbuild/BUILD/nco-5.3.3-build + RPM_EC=0 ++ jobs -p + exit 0 D: [iurt_root_command] Success!